Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 Gm11779-201ENSMUST00000118541 368 ntBASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 Gm12260-201ENSMUST00000122447 411 ntBASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 Gm27300-201ENSMUST00000184085 97 ntBASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 Gm27335-201ENSMUST00000184758 97 ntBASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 Gm18246-201ENSMUST00000221023 728 ntBASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a2Q9JLR1 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.24□□□□□ -0.29
Sec61a2Q9JLR1 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a2Q9JLR1 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a2Q9JLR1 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a2Q9JLR1 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a2Q9JLR1 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Sec61a2Q9JLR1 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Sec61a2Q9JLR1 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a2Q9JLR1 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a2Q9JLR1 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a2Q9JLR1 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.24□□□□□ -0.29
Sec61a2Q9JLR1 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a2Q9JLR1 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a2Q9JLR1 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a2Q9JLR1 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.24□□□□□ -0.29
Sec61a2Q9JLR1 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.24□□□□□ -0.29
Sec61a2Q9JLR1 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.24□□□□□ -0.29
Sec61a2Q9JLR1 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
Sec61a2Q9JLR1 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a2Q9JLR1 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.24□□□□□ -0.29
Sec61a2Q9JLR1 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a2Q9JLR1 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.24□□□□□ -0.29
Sec61a2Q9JLR1 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a2Q9JLR1 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a2Q9JLR1 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a2Q9JLR1 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a2Q9JLR1 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a2Q9JLR1 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a2Q9JLR1 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.24□□□□□ -0.29
Sec61a2Q9JLR1 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a2Q9JLR1 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a2Q9JLR1 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a2Q9JLR1 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a2Q9JLR1 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a2Q9JLR1 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Gm43767-201ENSMUST00000198933 381 ntBASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Sec61a2Q9JLR1 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms