Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ube3bQ9ES34 Gm27533-201ENSMUST00000183800 152 ntBASIC17.43■□□□□ 0.38
Ube3bQ9ES34 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.43■□□□□ 0.38
Ube3bQ9ES34 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC17.43■□□□□ 0.38
Ube3bQ9ES34 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ube3bQ9ES34 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ube3bQ9ES34 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ube3bQ9ES34 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ube3bQ9ES34 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ube3bQ9ES34 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ube3bQ9ES34 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ube3bQ9ES34 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ube3bQ9ES34 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ube3bQ9ES34 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ube3bQ9ES34 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Ube3bQ9ES34 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ube3bQ9ES34 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Ube3bQ9ES34 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ube3bQ9ES34 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ube3bQ9ES34 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ube3bQ9ES34 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ube3bQ9ES34 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ube3bQ9ES34 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ube3bQ9ES34 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ube3bQ9ES34 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ube3bQ9ES34 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ube3bQ9ES34 Gm27306-201ENSMUST00000183970 107 ntBASIC17.42■□□□□ 0.38
Ube3bQ9ES34 Gm19891-201ENSMUST00000189771 303 ntBASIC17.42■□□□□ 0.38
Ube3bQ9ES34 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ube3bQ9ES34 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ube3bQ9ES34 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ube3bQ9ES34 Gm6888-201ENSMUST00000221983 706 ntBASIC17.42■□□□□ 0.38
Ube3bQ9ES34 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC17.42■□□□□ 0.38
Ube3bQ9ES34 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Ube3bQ9ES34 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ube3bQ9ES34 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ube3bQ9ES34 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ube3bQ9ES34 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ube3bQ9ES34 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ube3bQ9ES34 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ube3bQ9ES34 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ube3bQ9ES34 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ube3bQ9ES34 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ube3bQ9ES34 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ube3bQ9ES34 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Ube3bQ9ES34 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ube3bQ9ES34 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ube3bQ9ES34 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ube3bQ9ES34 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ube3bQ9ES34 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ube3bQ9ES34 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ube3bQ9ES34 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ube3bQ9ES34 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ube3bQ9ES34 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ube3bQ9ES34 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Ube3bQ9ES34 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ube3bQ9ES34 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ube3bQ9ES34 Gm24543-201ENSMUST00000103867 82 ntBASIC17.41■□□□□ 0.38
Ube3bQ9ES34 Gm13453-201ENSMUST00000118708 357 ntBASIC17.41■□□□□ 0.38
Ube3bQ9ES34 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.41■□□□□ 0.38
Ube3bQ9ES34 Gm6222-201ENSMUST00000120787 396 ntBASIC17.41■□□□□ 0.38
Ube3bQ9ES34 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ube3bQ9ES34 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ube3bQ9ES34 Gm27631-201ENSMUST00000184163 466 ntBASIC17.41■□□□□ 0.38
Ube3bQ9ES34 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC17.41■□□□□ 0.38
Ube3bQ9ES34 Gm17837-201ENSMUST00000186435 985 ntBASIC17.41■□□□□ 0.38
Ube3bQ9ES34 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ube3bQ9ES34 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC17.41■□□□□ 0.38
Ube3bQ9ES34 Gm20949-201ENSMUST00000206478 952 ntBASIC17.41■□□□□ 0.38
Ube3bQ9ES34 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ube3bQ9ES34 AC090659.2-201ENSMUST00000225378 1186 ntBASIC17.41■□□□□ 0.38
Ube3bQ9ES34 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ube3bQ9ES34 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC17.41■□□□□ 0.38
Ube3bQ9ES34 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ube3bQ9ES34 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ube3bQ9ES34 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ube3bQ9ES34 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ube3bQ9ES34 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ube3bQ9ES34 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ube3bQ9ES34 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ube3bQ9ES34 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ube3bQ9ES34 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ube3bQ9ES34 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC17.4■□□□□ 0.38
Ube3bQ9ES34 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ube3bQ9ES34 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ube3bQ9ES34 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.4■□□□□ 0.38
Ube3bQ9ES34 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ube3bQ9ES34 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Ube3bQ9ES34 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ube3bQ9ES34 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ube3bQ9ES34 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ube3bQ9ES34 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Ube3bQ9ES34 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ube3bQ9ES34 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ube3bQ9ES34 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ube3bQ9ES34 Sybu-209ENSMUST00000228639 4113 ntBASIC17.4■□□□□ 0.38
Ube3bQ9ES34 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ube3bQ9ES34 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ube3bQ9ES34 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC17.4■□□□□ 0.38
Ube3bQ9ES34 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms