Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.54□□□□□ -0.08
Lima1Q9ERG0 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lima1Q9ERG0 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lima1Q9ERG0 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.54□□□□□ -0.08
Lima1Q9ERG0 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lima1Q9ERG0 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lima1Q9ERG0 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lima1Q9ERG0 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lima1Q9ERG0 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lima1Q9ERG0 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lima1Q9ERG0 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lima1Q9ERG0 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.54□□□□□ -0.08
Lima1Q9ERG0 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.54□□□□□ -0.08
Lima1Q9ERG0 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lima1Q9ERG0 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Lima1Q9ERG0 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lima1Q9ERG0 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lima1Q9ERG0 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.54□□□□□ -0.08
Lima1Q9ERG0 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Lima1Q9ERG0 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lima1Q9ERG0 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lima1Q9ERG0 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Lima1Q9ERG0 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Lima1Q9ERG0 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lima1Q9ERG0 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lima1Q9ERG0 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lima1Q9ERG0 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lima1Q9ERG0 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lima1Q9ERG0 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lima1Q9ERG0 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lima1Q9ERG0 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lima1Q9ERG0 Gm13418-201ENSMUST00000119097 944 ntBASIC14.53□□□□□ -0.08
Lima1Q9ERG0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.53□□□□□ -0.08
Lima1Q9ERG0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.53□□□□□ -0.08
Lima1Q9ERG0 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Lima1Q9ERG0 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.53□□□□□ -0.08
Lima1Q9ERG0 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.53□□□□□ -0.08
Lima1Q9ERG0 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Lima1Q9ERG0 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.53□□□□□ -0.08
Lima1Q9ERG0 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lima1Q9ERG0 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lima1Q9ERG0 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Lima1Q9ERG0 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lima1Q9ERG0 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Lima1Q9ERG0 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lima1Q9ERG0 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lima1Q9ERG0 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lima1Q9ERG0 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lima1Q9ERG0 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lima1Q9ERG0 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lima1Q9ERG0 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lima1Q9ERG0 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Lima1Q9ERG0 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lima1Q9ERG0 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Lima1Q9ERG0 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Lima1Q9ERG0 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Lima1Q9ERG0 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lima1Q9ERG0 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Lima1Q9ERG0 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lima1Q9ERG0 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lima1Q9ERG0 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lima1Q9ERG0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.52□□□□□ -0.09
Lima1Q9ERG0 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.52□□□□□ -0.09
Lima1Q9ERG0 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.52□□□□□ -0.09
Lima1Q9ERG0 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lima1Q9ERG0 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lima1Q9ERG0 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Lima1Q9ERG0 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lima1Q9ERG0 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.52□□□□□ -0.09
Lima1Q9ERG0 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lima1Q9ERG0 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lima1Q9ERG0 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lima1Q9ERG0 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lima1Q9ERG0 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lima1Q9ERG0 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lima1Q9ERG0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lima1Q9ERG0 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lima1Q9ERG0 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lima1Q9ERG0 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Lima1Q9ERG0 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.51□□□□□ -0.09
Lima1Q9ERG0 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lima1Q9ERG0 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lima1Q9ERG0 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Lima1Q9ERG0 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lima1Q9ERG0 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.51□□□□□ -0.09
Lima1Q9ERG0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lima1Q9ERG0 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lima1Q9ERG0 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lima1Q9ERG0 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lima1Q9ERG0 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lima1Q9ERG0 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lima1Q9ERG0 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Lima1Q9ERG0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lima1Q9ERG0 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Lima1Q9ERG0 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.51□□□□□ -0.09
Lima1Q9ERG0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.51□□□□□ -0.09
Lima1Q9ERG0 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.51□□□□□ -0.09
Lima1Q9ERG0 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Lima1Q9ERG0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Lima1Q9ERG0 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms