Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tubb3Q9ERD7 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb3Q9ERD7 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb3Q9ERD7 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb3Q9ERD7 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Tubb3Q9ERD7 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb3Q9ERD7 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb3Q9ERD7 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb3Q9ERD7 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb3Q9ERD7 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb3Q9ERD7 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb3Q9ERD7 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb3Q9ERD7 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb3Q9ERD7 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.61□□□□□ -0.07
Tubb3Q9ERD7 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.61□□□□□ -0.07
Tubb3Q9ERD7 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb3Q9ERD7 Gm25911-201ENSMUST00000157621 56 ntBASIC14.61□□□□□ -0.07
Tubb3Q9ERD7 Gm17271-201ENSMUST00000165535 355 ntBASIC14.61□□□□□ -0.07
Tubb3Q9ERD7 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.61□□□□□ -0.07
Tubb3Q9ERD7 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb3Q9ERD7 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.61□□□□□ -0.07
Tubb3Q9ERD7 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Tubb3Q9ERD7 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb3Q9ERD7 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb3Q9ERD7 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb3Q9ERD7 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Tubb3Q9ERD7 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb3Q9ERD7 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.61□□□□□ -0.07
Tubb3Q9ERD7 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Tubb3Q9ERD7 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb3Q9ERD7 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb3Q9ERD7 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb3Q9ERD7 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tubb3Q9ERD7 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tubb3Q9ERD7 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tubb3Q9ERD7 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tubb3Q9ERD7 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Tubb3Q9ERD7 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tubb3Q9ERD7 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tubb3Q9ERD7 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Tubb3Q9ERD7 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tubb3Q9ERD7 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tubb3Q9ERD7 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Tubb3Q9ERD7 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Tubb3Q9ERD7 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Tubb3Q9ERD7 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.6□□□□□ -0.07
Tubb3Q9ERD7 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tubb3Q9ERD7 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.6□□□□□ -0.07
Tubb3Q9ERD7 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Tubb3Q9ERD7 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tubb3Q9ERD7 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.6□□□□□ -0.07
Tubb3Q9ERD7 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.6□□□□□ -0.07
Tubb3Q9ERD7 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.6□□□□□ -0.07
Tubb3Q9ERD7 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tubb3Q9ERD7 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tubb3Q9ERD7 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tubb3Q9ERD7 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Tubb3Q9ERD7 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tubb3Q9ERD7 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tubb3Q9ERD7 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tubb3Q9ERD7 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tubb3Q9ERD7 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tubb3Q9ERD7 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tubb3Q9ERD7 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Tubb3Q9ERD7 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.59□□□□□ -0.07
Tubb3Q9ERD7 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.59□□□□□ -0.07
Tubb3Q9ERD7 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tubb3Q9ERD7 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tubb3Q9ERD7 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tubb3Q9ERD7 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.59□□□□□ -0.07
Tubb3Q9ERD7 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Tubb3Q9ERD7 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tubb3Q9ERD7 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tubb3Q9ERD7 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
Tubb3Q9ERD7 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms