Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr3Q9DCF9 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr3Q9DCF9 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr3Q9DCF9 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr3Q9DCF9 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.15□□□□□ -0.3
Ssr3Q9DCF9 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr3Q9DCF9 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr3Q9DCF9 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr3Q9DCF9 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ssr3Q9DCF9 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr3Q9DCF9 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr3Q9DCF9 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr3Q9DCF9 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.15□□□□□ -0.3
Ssr3Q9DCF9 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr3Q9DCF9 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr3Q9DCF9 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr3Q9DCF9 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr3Q9DCF9 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.15□□□□□ -0.3
Ssr3Q9DCF9 Gm9172-201ENSMUST00000212092 954 ntBASIC13.15□□□□□ -0.3
Ssr3Q9DCF9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr3Q9DCF9 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ssr3Q9DCF9 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.15□□□□□ -0.3
Ssr3Q9DCF9 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ssr3Q9DCF9 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.15□□□□□ -0.3
Ssr3Q9DCF9 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr3Q9DCF9 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.15□□□□□ -0.3
Ssr3Q9DCF9 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr3Q9DCF9 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ssr3Q9DCF9 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr3Q9DCF9 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr3Q9DCF9 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr3Q9DCF9 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr3Q9DCF9 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssr3Q9DCF9 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Ssr3Q9DCF9 Matn2-206ENSMUST00000228570 2798 ntBASIC13.15□□□□□ -0.31
Ssr3Q9DCF9 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr3Q9DCF9 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr3Q9DCF9 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr3Q9DCF9 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr3Q9DCF9 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Ssr3Q9DCF9 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr3Q9DCF9 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr3Q9DCF9 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr3Q9DCF9 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Ssr3Q9DCF9 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr3Q9DCF9 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr3Q9DCF9 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr3Q9DCF9 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr3Q9DCF9 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr3Q9DCF9 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr3Q9DCF9 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr3Q9DCF9 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.14□□□□□ -0.31
Ssr3Q9DCF9 Gm18959-201ENSMUST00000208954 655 ntBASIC13.14□□□□□ -0.31
Ssr3Q9DCF9 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr3Q9DCF9 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr3Q9DCF9 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr3Q9DCF9 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.14□□□□□ -0.31
Ssr3Q9DCF9 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr3Q9DCF9 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr3Q9DCF9 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ssr3Q9DCF9 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ssr3Q9DCF9 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr3Q9DCF9 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr3Q9DCF9 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr3Q9DCF9 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssr3Q9DCF9 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ssr3Q9DCF9 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssr3Q9DCF9 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssr3Q9DCF9 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssr3Q9DCF9 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssr3Q9DCF9 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssr3Q9DCF9 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.13□□□□□ -0.31
Ssr3Q9DCF9 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssr3Q9DCF9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ssr3Q9DCF9 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.13□□□□□ -0.31
Ssr3Q9DCF9 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ssr3Q9DCF9 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ssr3Q9DCF9 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ssr3Q9DCF9 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssr3Q9DCF9 Gm8520-201ENSMUST00000186517 868 ntBASIC13.13□□□□□ -0.31
Ssr3Q9DCF9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.13□□□□□ -0.31
Ssr3Q9DCF9 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.13□□□□□ -0.31
Ssr3Q9DCF9 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.13□□□□□ -0.31
Ssr3Q9DCF9 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Ssr3Q9DCF9 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssr3Q9DCF9 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ssr3Q9DCF9 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssr3Q9DCF9 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssr3Q9DCF9 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssr3Q9DCF9 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssr3Q9DCF9 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ssr3Q9DCF9 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssr3Q9DCF9 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ssr3Q9DCF9 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssr3Q9DCF9 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssr3Q9DCF9 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ssr3Q9DCF9 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ssr3Q9DCF9 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ssr3Q9DCF9 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ssr3Q9DCF9 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms