Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp2aQ9DB34 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.35■□□□□ 0.05
Chmp2aQ9DB34 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Chmp2aQ9DB34 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp2aQ9DB34 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chmp2aQ9DB34 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Chmp2aQ9DB34 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2aQ9DB34 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2aQ9DB34 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2aQ9DB34 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2aQ9DB34 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2aQ9DB34 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Chmp2aQ9DB34 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2aQ9DB34 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Chmp2aQ9DB34 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2aQ9DB34 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2aQ9DB34 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.34■□□□□ 0.05
Chmp2aQ9DB34 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.34■□□□□ 0.05
Chmp2aQ9DB34 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2aQ9DB34 Gm11025-201ENSMUST00000140773 466 ntBASIC15.34■□□□□ 0.05
Chmp2aQ9DB34 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2aQ9DB34 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.34■□□□□ 0.05
Chmp2aQ9DB34 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2aQ9DB34 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.34■□□□□ 0.05
Chmp2aQ9DB34 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Chmp2aQ9DB34 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Chmp2aQ9DB34 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2aQ9DB34 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2aQ9DB34 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2aQ9DB34 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2aQ9DB34 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.34■□□□□ 0.05
Chmp2aQ9DB34 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2aQ9DB34 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2aQ9DB34 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2aQ9DB34 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chmp2aQ9DB34 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Chmp2aQ9DB34 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chmp2aQ9DB34 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chmp2aQ9DB34 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chmp2aQ9DB34 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chmp2aQ9DB34 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chmp2aQ9DB34 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chmp2aQ9DB34 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chmp2aQ9DB34 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Chmp2aQ9DB34 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp2aQ9DB34 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp2aQ9DB34 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp2aQ9DB34 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp2aQ9DB34 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp2aQ9DB34 Rpph1-201ENSMUST00000175096 319 ntBASIC15.33■□□□□ 0.04
Chmp2aQ9DB34 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.33■□□□□ 0.04
Chmp2aQ9DB34 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.33■□□□□ 0.04
Chmp2aQ9DB34 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.33■□□□□ 0.04
Chmp2aQ9DB34 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp2aQ9DB34 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp2aQ9DB34 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp2aQ9DB34 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp2aQ9DB34 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp2aQ9DB34 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp2aQ9DB34 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp2aQ9DB34 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp2aQ9DB34 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp2aQ9DB34 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp2aQ9DB34 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp2aQ9DB34 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp2aQ9DB34 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp2aQ9DB34 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp2aQ9DB34 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chmp2aQ9DB34 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.32■□□□□ 0.04
Chmp2aQ9DB34 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp2aQ9DB34 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp2aQ9DB34 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.32■□□□□ 0.04
Chmp2aQ9DB34 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp2aQ9DB34 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp2aQ9DB34 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp2aQ9DB34 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp2aQ9DB34 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.32■□□□□ 0.04
Chmp2aQ9DB34 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp2aQ9DB34 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Chmp2aQ9DB34 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.32■□□□□ 0.04
Chmp2aQ9DB34 Gm16026-204ENSMUST00000162652 683 ntBASIC15.32■□□□□ 0.04
Chmp2aQ9DB34 Gm6736-201ENSMUST00000166583 948 ntBASIC15.32■□□□□ 0.04
Chmp2aQ9DB34 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Chmp2aQ9DB34 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp2aQ9DB34 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.32■□□□□ 0.04
Chmp2aQ9DB34 Gm20553-201ENSMUST00000204205 844 ntBASIC15.32■□□□□ 0.04
Chmp2aQ9DB34 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp2aQ9DB34 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.32■□□□□ 0.04
Chmp2aQ9DB34 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp2aQ9DB34 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp2aQ9DB34 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp2aQ9DB34 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp2aQ9DB34 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.32■□□□□ 0.04
Chmp2aQ9DB34 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.32■□□□□ 0.04
Chmp2aQ9DB34 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
Chmp2aQ9DB34 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Chmp2aQ9DB34 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp2aQ9DB34 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.32■□□□□ 0.04
Chmp2aQ9DB34 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chmp2aQ9DB34 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms