Protein–RNA interactions for Protein: Q9DAW6

Prpf4, U4/U6 small nuclear ribonucleoprotein Prp4, mousemouse

Known RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf4Q9DAW6 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf4Q9DAW6 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Prpf4Q9DAW6 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.31■□□□□ 0.04
Prpf4Q9DAW6 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.3■□□□□ 0.04
Prpf4Q9DAW6 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Prpf4Q9DAW6 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf4Q9DAW6 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC15.3■□□□□ 0.04
Prpf4Q9DAW6 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf4Q9DAW6 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf4Q9DAW6 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf4Q9DAW6 Gm8749-201ENSMUST00000117737 331 ntBASIC15.3■□□□□ 0.04
Prpf4Q9DAW6 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.3■□□□□ 0.04
Prpf4Q9DAW6 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf4Q9DAW6 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.3■□□□□ 0.04
Prpf4Q9DAW6 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf4Q9DAW6 Gm27357-201ENSMUST00000183754 135 ntBASIC15.3■□□□□ 0.04
Prpf4Q9DAW6 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf4Q9DAW6 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.3■□□□□ 0.04
Prpf4Q9DAW6 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf4Q9DAW6 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf4Q9DAW6 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf4Q9DAW6 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf4Q9DAW6 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Prpf4Q9DAW6 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf4Q9DAW6 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf4Q9DAW6 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf4Q9DAW6 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Prpf4Q9DAW6 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.3■□□□□ 0.04
Prpf4Q9DAW6 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf4Q9DAW6 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf4Q9DAW6 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf4Q9DAW6 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf4Q9DAW6 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.29■□□□□ 0.04
Prpf4Q9DAW6 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf4Q9DAW6 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf4Q9DAW6 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Prpf4Q9DAW6 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf4Q9DAW6 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf4Q9DAW6 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.29■□□□□ 0.04
Prpf4Q9DAW6 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Prpf4Q9DAW6 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.29■□□□□ 0.04
Prpf4Q9DAW6 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf4Q9DAW6 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.29■□□□□ 0.04
Prpf4Q9DAW6 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf4Q9DAW6 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.29■□□□□ 0.04
Prpf4Q9DAW6 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.29■□□□□ 0.04
Prpf4Q9DAW6 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf4Q9DAW6 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Prpf4Q9DAW6 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf4Q9DAW6 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Prpf4Q9DAW6 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf4Q9DAW6 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf4Q9DAW6 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf4Q9DAW6 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Prpf4Q9DAW6 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf4Q9DAW6 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf4Q9DAW6 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf4Q9DAW6 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf4Q9DAW6 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf4Q9DAW6 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf4Q9DAW6 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf4Q9DAW6 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf4Q9DAW6 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf4Q9DAW6 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf4Q9DAW6 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf4Q9DAW6 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Prpf4Q9DAW6 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf4Q9DAW6 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf4Q9DAW6 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.28■□□□□ 0.04
Prpf4Q9DAW6 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Prpf4Q9DAW6 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf4Q9DAW6 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf4Q9DAW6 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf4Q9DAW6 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.28■□□□□ 0.04
Prpf4Q9DAW6 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf4Q9DAW6 Gm12895-201ENSMUST00000122214 226 ntBASIC15.28■□□□□ 0.04
Prpf4Q9DAW6 Gm44487-201ENSMUST00000205145 325 ntBASIC15.28■□□□□ 0.04
Prpf4Q9DAW6 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf4Q9DAW6 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf4Q9DAW6 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf4Q9DAW6 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf4Q9DAW6 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf4Q9DAW6 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf4Q9DAW6 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf4Q9DAW6 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Prpf4Q9DAW6 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf4Q9DAW6 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf4Q9DAW6 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf4Q9DAW6 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf4Q9DAW6 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf4Q9DAW6 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf4Q9DAW6 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf4Q9DAW6 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf4Q9DAW6 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf4Q9DAW6 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.27■□□□□ 0.04
Prpf4Q9DAW6 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.27■□□□□ 0.04
Prpf4Q9DAW6 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf4Q9DAW6 Gm9726-201ENSMUST00000180321 678 ntBASIC15.27■□□□□ 0.04
Prpf4Q9DAW6 Gm9682-201ENSMUST00000197505 556 ntBASIC15.27■□□□□ 0.04
Prpf4Q9DAW6 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms