Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chaf1bQ9D0N7 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.84□□□□□ -0.19
Chaf1bQ9D0N7 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Chaf1bQ9D0N7 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.84□□□□□ -0.19
Chaf1bQ9D0N7 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chaf1bQ9D0N7 Gm8655-201ENSMUST00000221159 852 ntBASIC13.84□□□□□ -0.19
Chaf1bQ9D0N7 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chaf1bQ9D0N7 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Chaf1bQ9D0N7 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chaf1bQ9D0N7 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Chaf1bQ9D0N7 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chaf1bQ9D0N7 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chaf1bQ9D0N7 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.84□□□□□ -0.19
Chaf1bQ9D0N7 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chaf1bQ9D0N7 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.84□□□□□ -0.19
Chaf1bQ9D0N7 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Chaf1bQ9D0N7 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chaf1bQ9D0N7 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Chaf1bQ9D0N7 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chaf1bQ9D0N7 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.83□□□□□ -0.19
Chaf1bQ9D0N7 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Chaf1bQ9D0N7 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Chaf1bQ9D0N7 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chaf1bQ9D0N7 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Chaf1bQ9D0N7 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chaf1bQ9D0N7 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Chaf1bQ9D0N7 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chaf1bQ9D0N7 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.83□□□□□ -0.2
Chaf1bQ9D0N7 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Chaf1bQ9D0N7 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.83□□□□□ -0.2
Chaf1bQ9D0N7 Gm15358-201ENSMUST00000119249 520 ntBASIC13.83□□□□□ -0.2
Chaf1bQ9D0N7 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chaf1bQ9D0N7 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.83□□□□□ -0.2
Chaf1bQ9D0N7 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chaf1bQ9D0N7 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Chaf1bQ9D0N7 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chaf1bQ9D0N7 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Chaf1bQ9D0N7 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chaf1bQ9D0N7 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chaf1bQ9D0N7 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chaf1bQ9D0N7 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chaf1bQ9D0N7 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Chaf1bQ9D0N7 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chaf1bQ9D0N7 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chaf1bQ9D0N7 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chaf1bQ9D0N7 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Chaf1bQ9D0N7 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chaf1bQ9D0N7 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chaf1bQ9D0N7 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.83□□□□□ -0.2
Chaf1bQ9D0N7 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Chaf1bQ9D0N7 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chaf1bQ9D0N7 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.83□□□□□ -0.2
Chaf1bQ9D0N7 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Chaf1bQ9D0N7 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Chaf1bQ9D0N7 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Chaf1bQ9D0N7 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chaf1bQ9D0N7 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chaf1bQ9D0N7 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Chaf1bQ9D0N7 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chaf1bQ9D0N7 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chaf1bQ9D0N7 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chaf1bQ9D0N7 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chaf1bQ9D0N7 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.82□□□□□ -0.2
Chaf1bQ9D0N7 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Chaf1bQ9D0N7 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Chaf1bQ9D0N7 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chaf1bQ9D0N7 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.82□□□□□ -0.2
Chaf1bQ9D0N7 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Chaf1bQ9D0N7 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.82□□□□□ -0.2
Chaf1bQ9D0N7 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Chaf1bQ9D0N7 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chaf1bQ9D0N7 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.82□□□□□ -0.2
Chaf1bQ9D0N7 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Chaf1bQ9D0N7 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chaf1bQ9D0N7 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Chaf1bQ9D0N7 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Chaf1bQ9D0N7 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chaf1bQ9D0N7 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Chaf1bQ9D0N7 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.82□□□□□ -0.2
Chaf1bQ9D0N7 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.82□□□□□ -0.2
Chaf1bQ9D0N7 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chaf1bQ9D0N7 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.82□□□□□ -0.2
Chaf1bQ9D0N7 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Chaf1bQ9D0N7 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chaf1bQ9D0N7 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chaf1bQ9D0N7 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Chaf1bQ9D0N7 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chaf1bQ9D0N7 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chaf1bQ9D0N7 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chaf1bQ9D0N7 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chaf1bQ9D0N7 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Chaf1bQ9D0N7 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Chaf1bQ9D0N7 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Chaf1bQ9D0N7 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Chaf1bQ9D0N7 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chaf1bQ9D0N7 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Chaf1bQ9D0N7 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chaf1bQ9D0N7 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chaf1bQ9D0N7 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Chaf1bQ9D0N7 Gm8097-201ENSMUST00000117903 829 ntBASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms