Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ssu72Q9CY97 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ssu72Q9CY97 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ssu72Q9CY97 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Ssu72Q9CY97 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Ssu72Q9CY97 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.59□□□□□ -0.07
Ssu72Q9CY97 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ssu72Q9CY97 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.59□□□□□ -0.07
Ssu72Q9CY97 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ssu72Q9CY97 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ssu72Q9CY97 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ssu72Q9CY97 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Ssu72Q9CY97 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Ssu72Q9CY97 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ssu72Q9CY97 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.58□□□□□ -0.08
Ssu72Q9CY97 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ssu72Q9CY97 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ssu72Q9CY97 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ssu72Q9CY97 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ssu72Q9CY97 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ssu72Q9CY97 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
Ssu72Q9CY97 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ssu72Q9CY97 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Ssu72Q9CY97 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ssu72Q9CY97 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ssu72Q9CY97 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ssu72Q9CY97 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ssu72Q9CY97 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Ssu72Q9CY97 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ssu72Q9CY97 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.58□□□□□ -0.08
Ssu72Q9CY97 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ssu72Q9CY97 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Ssu72Q9CY97 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ssu72Q9CY97 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ssu72Q9CY97 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ssu72Q9CY97 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Ssu72Q9CY97 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.58□□□□□ -0.08
Ssu72Q9CY97 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ssu72Q9CY97 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ssu72Q9CY97 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ssu72Q9CY97 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ssu72Q9CY97 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ssu72Q9CY97 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.58□□□□□ -0.08
Ssu72Q9CY97 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ssu72Q9CY97 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Ssu72Q9CY97 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ssu72Q9CY97 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ssu72Q9CY97 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ssu72Q9CY97 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ssu72Q9CY97 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ssu72Q9CY97 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ssu72Q9CY97 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ssu72Q9CY97 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Ssu72Q9CY97 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ssu72Q9CY97 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ssu72Q9CY97 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Ssu72Q9CY97 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ssu72Q9CY97 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.57□□□□□ -0.08
Ssu72Q9CY97 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ssu72Q9CY97 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.57□□□□□ -0.08
Ssu72Q9CY97 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Ssu72Q9CY97 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ssu72Q9CY97 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ssu72Q9CY97 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ssu72Q9CY97 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ssu72Q9CY97 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ssu72Q9CY97 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ssu72Q9CY97 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.57□□□□□ -0.08
Ssu72Q9CY97 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ssu72Q9CY97 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ssu72Q9CY97 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ssu72Q9CY97 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ssu72Q9CY97 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ssu72Q9CY97 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ssu72Q9CY97 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ssu72Q9CY97 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ssu72Q9CY97 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ssu72Q9CY97 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssu72Q9CY97 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ssu72Q9CY97 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ssu72Q9CY97 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssu72Q9CY97 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ssu72Q9CY97 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssu72Q9CY97 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssu72Q9CY97 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ssu72Q9CY97 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ssu72Q9CY97 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssu72Q9CY97 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssu72Q9CY97 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssu72Q9CY97 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssu72Q9CY97 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Ssu72Q9CY97 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.56□□□□□ -0.08
Ssu72Q9CY97 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssu72Q9CY97 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.56□□□□□ -0.08
Ssu72Q9CY97 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssu72Q9CY97 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Ssu72Q9CY97 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ssu72Q9CY97 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssu72Q9CY97 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ssu72Q9CY97 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms