Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.61■□□□□ 0.25
Chd1lQ9CXF7 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Chd1lQ9CXF7 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd1lQ9CXF7 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd1lQ9CXF7 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd1lQ9CXF7 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chd1lQ9CXF7 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd1lQ9CXF7 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd1lQ9CXF7 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd1lQ9CXF7 Ntrk2-208ENSMUST00000225583 2719 ntBASIC16.61■□□□□ 0.25
Chd1lQ9CXF7 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.61■□□□□ 0.25
Chd1lQ9CXF7 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Chd1lQ9CXF7 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd1lQ9CXF7 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd1lQ9CXF7 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd1lQ9CXF7 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd1lQ9CXF7 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd1lQ9CXF7 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chd1lQ9CXF7 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chd1lQ9CXF7 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chd1lQ9CXF7 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd1lQ9CXF7 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd1lQ9CXF7 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd1lQ9CXF7 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Chd1lQ9CXF7 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chd1lQ9CXF7 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd1lQ9CXF7 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd1lQ9CXF7 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chd1lQ9CXF7 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd1lQ9CXF7 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd1lQ9CXF7 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Chd1lQ9CXF7 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chd1lQ9CXF7 Gm42769-201ENSMUST00000198576 1659 ntBASIC16.6■□□□□ 0.25
Chd1lQ9CXF7 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd1lQ9CXF7 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd1lQ9CXF7 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chd1lQ9CXF7 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chd1lQ9CXF7 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Chd1lQ9CXF7 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd1lQ9CXF7 Gm8655-201ENSMUST00000221159 852 ntBASIC16.6■□□□□ 0.25
Chd1lQ9CXF7 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chd1lQ9CXF7 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Chd1lQ9CXF7 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd1lQ9CXF7 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd1lQ9CXF7 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.6■□□□□ 0.25
Chd1lQ9CXF7 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd1lQ9CXF7 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd1lQ9CXF7 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd1lQ9CXF7 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd1lQ9CXF7 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd1lQ9CXF7 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd1lQ9CXF7 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd1lQ9CXF7 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd1lQ9CXF7 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd1lQ9CXF7 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1lQ9CXF7 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1lQ9CXF7 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1lQ9CXF7 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Chd1lQ9CXF7 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1lQ9CXF7 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1lQ9CXF7 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1lQ9CXF7 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1lQ9CXF7 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1lQ9CXF7 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1lQ9CXF7 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.59■□□□□ 0.25
Chd1lQ9CXF7 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.59■□□□□ 0.25
Chd1lQ9CXF7 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1lQ9CXF7 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.59■□□□□ 0.25
Chd1lQ9CXF7 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
Chd1lQ9CXF7 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1lQ9CXF7 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1lQ9CXF7 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1lQ9CXF7 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1lQ9CXF7 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1lQ9CXF7 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Chd1lQ9CXF7 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1lQ9CXF7 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1lQ9CXF7 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1lQ9CXF7 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1lQ9CXF7 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1lQ9CXF7 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1lQ9CXF7 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1lQ9CXF7 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Chd1lQ9CXF7 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1lQ9CXF7 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1lQ9CXF7 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1lQ9CXF7 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1lQ9CXF7 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Chd1lQ9CXF7 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Chd1lQ9CXF7 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Chd1lQ9CXF7 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Chd1lQ9CXF7 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chd1lQ9CXF7 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chd1lQ9CXF7 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd1lQ9CXF7 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.58■□□□□ 0.24
Chd1lQ9CXF7 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.58■□□□□ 0.24
Chd1lQ9CXF7 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chd1lQ9CXF7 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chd1lQ9CXF7 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chd1lQ9CXF7 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms