Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cldnd1Q9CQX5 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cldnd1Q9CQX5 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Cldnd1Q9CQX5 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Cldnd1Q9CQX5 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cldnd1Q9CQX5 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cldnd1Q9CQX5 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Cldnd1Q9CQX5 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cldnd1Q9CQX5 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.95□□□□□ -0.02
Cldnd1Q9CQX5 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cldnd1Q9CQX5 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cldnd1Q9CQX5 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cldnd1Q9CQX5 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cldnd1Q9CQX5 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cldnd1Q9CQX5 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.95□□□□□ -0.02
Cldnd1Q9CQX5 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cldnd1Q9CQX5 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Cldnd1Q9CQX5 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.95□□□□□ -0.02
Cldnd1Q9CQX5 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cldnd1Q9CQX5 Gm12390-201ENSMUST00000117897 397 ntBASIC14.95□□□□□ -0.02
Cldnd1Q9CQX5 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.95□□□□□ -0.02
Cldnd1Q9CQX5 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cldnd1Q9CQX5 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.95□□□□□ -0.02
Cldnd1Q9CQX5 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cldnd1Q9CQX5 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cldnd1Q9CQX5 Olfr286-202ENSMUST00000205305 969 ntBASIC14.95□□□□□ -0.02
Cldnd1Q9CQX5 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.95□□□□□ -0.02
Cldnd1Q9CQX5 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cldnd1Q9CQX5 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Cldnd1Q9CQX5 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.95□□□□□ -0.02
Cldnd1Q9CQX5 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cldnd1Q9CQX5 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cldnd1Q9CQX5 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cldnd1Q9CQX5 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.95□□□□□ -0.02
Cldnd1Q9CQX5 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cldnd1Q9CQX5 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Cldnd1Q9CQX5 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cldnd1Q9CQX5 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cldnd1Q9CQX5 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.94□□□□□ -0.02
Cldnd1Q9CQX5 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Cldnd1Q9CQX5 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cldnd1Q9CQX5 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Cldnd1Q9CQX5 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cldnd1Q9CQX5 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cldnd1Q9CQX5 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cldnd1Q9CQX5 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cldnd1Q9CQX5 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.94□□□□□ -0.02
Cldnd1Q9CQX5 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cldnd1Q9CQX5 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cldnd1Q9CQX5 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cldnd1Q9CQX5 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.94□□□□□ -0.02
Cldnd1Q9CQX5 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Cldnd1Q9CQX5 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.94□□□□□ -0.02
Cldnd1Q9CQX5 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.94□□□□□ -0.02
Cldnd1Q9CQX5 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Cldnd1Q9CQX5 Mir7654-201ENSMUST00000185082 70 ntBASIC14.94□□□□□ -0.02
Cldnd1Q9CQX5 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cldnd1Q9CQX5 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.94□□□□□ -0.02
Cldnd1Q9CQX5 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cldnd1Q9CQX5 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cldnd1Q9CQX5 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cldnd1Q9CQX5 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cldnd1Q9CQX5 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Cldnd1Q9CQX5 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Cldnd1Q9CQX5 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cldnd1Q9CQX5 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Cldnd1Q9CQX5 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cldnd1Q9CQX5 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cldnd1Q9CQX5 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Cldnd1Q9CQX5 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cldnd1Q9CQX5 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cldnd1Q9CQX5 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cldnd1Q9CQX5 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cldnd1Q9CQX5 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Cldnd1Q9CQX5 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cldnd1Q9CQX5 BC001981-202ENSMUST00000191393 1545 ntBASIC14.93□□□□□ -0.02
Cldnd1Q9CQX5 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cldnd1Q9CQX5 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Cldnd1Q9CQX5 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cldnd1Q9CQX5 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cldnd1Q9CQX5 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cldnd1Q9CQX5 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cldnd1Q9CQX5 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
Cldnd1Q9CQX5 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cldnd1Q9CQX5 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cldnd1Q9CQX5 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cldnd1Q9CQX5 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.93□□□□□ -0.02
Cldnd1Q9CQX5 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.93□□□□□ -0.02
Cldnd1Q9CQX5 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Cldnd1Q9CQX5 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Cldnd1Q9CQX5 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
Cldnd1Q9CQX5 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.93□□□□□ -0.02
Cldnd1Q9CQX5 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Cldnd1Q9CQX5 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.93□□□□□ -0.02
Cldnd1Q9CQX5 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cldnd1Q9CQX5 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.93□□□□□ -0.02
Cldnd1Q9CQX5 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cldnd1Q9CQX5 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.93□□□□□ -0.02
Cldnd1Q9CQX5 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cldnd1Q9CQX5 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms