Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Lsm7Q9CQQ8 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm7Q9CQQ8 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm7Q9CQQ8 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm7Q9CQQ8 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.83□□□□□ -0.04
Lsm7Q9CQQ8 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm7Q9CQQ8 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm7Q9CQQ8 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm7Q9CQQ8 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm7Q9CQQ8 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Lsm7Q9CQQ8 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.83□□□□□ -0.04
Lsm7Q9CQQ8 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm7Q9CQQ8 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm7Q9CQQ8 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Lsm7Q9CQQ8 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm7Q9CQQ8 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.83□□□□□ -0.04
Lsm7Q9CQQ8 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm7Q9CQQ8 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
Lsm7Q9CQQ8 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lsm7Q9CQQ8 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 Gm9726-201ENSMUST00000180321 678 ntBASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 Gm2451-201ENSMUST00000199447 999 ntBASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 Gm10290-201ENSMUST00000200451 999 ntBASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 BC037039-201ENSMUST00000192003 2205 ntBASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Lsm7Q9CQQ8 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm7Q9CQQ8 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Lsm7Q9CQQ8 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Lsm7Q9CQQ8 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Lsm7Q9CQQ8 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
Lsm7Q9CQQ8 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm7Q9CQQ8 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm7Q9CQQ8 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm7Q9CQQ8 Gm8749-201ENSMUST00000117737 331 ntBASIC14.81□□□□□ -0.04
Lsm7Q9CQQ8 Gm13015-201ENSMUST00000118674 204 ntBASIC14.81□□□□□ -0.04
Lsm7Q9CQQ8 Mir7023-201ENSMUST00000185093 64 ntBASIC14.81□□□□□ -0.04
Lsm7Q9CQQ8 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm7Q9CQQ8 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm7Q9CQQ8 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm7Q9CQQ8 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.81□□□□□ -0.04
Lsm7Q9CQQ8 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Lsm7Q9CQQ8 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm7Q9CQQ8 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Lsm7Q9CQQ8 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Lsm7Q9CQQ8 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm7Q9CQQ8 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm7Q9CQQ8 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm7Q9CQQ8 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm7Q9CQQ8 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Lsm7Q9CQQ8 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm7Q9CQQ8 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lsm7Q9CQQ8 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm7Q9CQQ8 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm7Q9CQQ8 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm7Q9CQQ8 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm7Q9CQQ8 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm7Q9CQQ8 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.8□□□□□ -0.04
Lsm7Q9CQQ8 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm7Q9CQQ8 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm7Q9CQQ8 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm7Q9CQQ8 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm7Q9CQQ8 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm7Q9CQQ8 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Lsm7Q9CQQ8 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.8□□□□□ -0.04
Lsm7Q9CQQ8 Gm27622-201ENSMUST00000183779 60 ntBASIC14.8□□□□□ -0.04
Lsm7Q9CQQ8 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm7Q9CQQ8 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lsm7Q9CQQ8 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms