Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf8Q99PV0 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf8Q99PV0 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf8Q99PV0 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Gm9719-201ENSMUST00000162765 543 ntBASIC12.05□□□□□ -0.48
Prpf8Q99PV0 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Gm45244-201ENSMUST00000211328 2200 ntBASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Gm15487-201ENSMUST00000122373 465 ntBASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Prpf8Q99PV0 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Gm15483-201ENSMUST00000120338 456 ntBASIC12.04□□□□□ -0.48
Prpf8Q99PV0 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Gm5479-201ENSMUST00000160578 435 ntBASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Gm22189-201ENSMUST00000103822 86 ntBASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Gm7488-201ENSMUST00000117148 684 ntBASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Prpf8Q99PV0 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf8Q99PV0 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms