Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim11Q99PQ2 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Trim11Q99PQ2 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim11Q99PQ2 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.75■□□□□ 0.27
Trim11Q99PQ2 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim11Q99PQ2 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trim11Q99PQ2 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim11Q99PQ2 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.74■□□□□ 0.27
Trim11Q99PQ2 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim11Q99PQ2 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim11Q99PQ2 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim11Q99PQ2 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim11Q99PQ2 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim11Q99PQ2 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.74■□□□□ 0.27
Trim11Q99PQ2 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim11Q99PQ2 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trim11Q99PQ2 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.74■□□□□ 0.27
Trim11Q99PQ2 Gm18733-201ENSMUST00000173950 856 ntBASIC16.74■□□□□ 0.27
Trim11Q99PQ2 Gm9726-201ENSMUST00000180321 678 ntBASIC16.74■□□□□ 0.27
Trim11Q99PQ2 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.74■□□□□ 0.27
Trim11Q99PQ2 Mzt1-203ENSMUST00000227948 952 ntBASIC16.74■□□□□ 0.27
Trim11Q99PQ2 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim11Q99PQ2 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim11Q99PQ2 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim11Q99PQ2 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim11Q99PQ2 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim11Q99PQ2 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.74■□□□□ 0.27
Trim11Q99PQ2 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim11Q99PQ2 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim11Q99PQ2 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim11Q99PQ2 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trim11Q99PQ2 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.74■□□□□ 0.27
Trim11Q99PQ2 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim11Q99PQ2 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim11Q99PQ2 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim11Q99PQ2 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim11Q99PQ2 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim11Q99PQ2 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim11Q99PQ2 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.73■□□□□ 0.27
Trim11Q99PQ2 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim11Q99PQ2 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim11Q99PQ2 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim11Q99PQ2 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trim11Q99PQ2 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim11Q99PQ2 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Trim11Q99PQ2 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim11Q99PQ2 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim11Q99PQ2 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim11Q99PQ2 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim11Q99PQ2 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim11Q99PQ2 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Trim11Q99PQ2 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim11Q99PQ2 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim11Q99PQ2 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trim11Q99PQ2 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim11Q99PQ2 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.73■□□□□ 0.27
Trim11Q99PQ2 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.73■□□□□ 0.27
Trim11Q99PQ2 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim11Q99PQ2 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trim11Q99PQ2 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.73■□□□□ 0.27
Trim11Q99PQ2 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim11Q99PQ2 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim11Q99PQ2 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim11Q99PQ2 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim11Q99PQ2 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim11Q99PQ2 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim11Q99PQ2 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trim11Q99PQ2 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.72■□□□□ 0.27
Trim11Q99PQ2 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.72■□□□□ 0.27
Trim11Q99PQ2 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim11Q99PQ2 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim11Q99PQ2 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC16.72■□□□□ 0.27
Trim11Q99PQ2 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim11Q99PQ2 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim11Q99PQ2 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim11Q99PQ2 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim11Q99PQ2 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim11Q99PQ2 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim11Q99PQ2 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.72■□□□□ 0.27
Trim11Q99PQ2 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.72■□□□□ 0.27
Trim11Q99PQ2 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim11Q99PQ2 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.72■□□□□ 0.27
Trim11Q99PQ2 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim11Q99PQ2 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim11Q99PQ2 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim11Q99PQ2 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim11Q99PQ2 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.72■□□□□ 0.27
Trim11Q99PQ2 Gm10154-201ENSMUST00000084445 354 ntBASIC16.72■□□□□ 0.27
Trim11Q99PQ2 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim11Q99PQ2 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim11Q99PQ2 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim11Q99PQ2 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim11Q99PQ2 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim11Q99PQ2 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim11Q99PQ2 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trim11Q99PQ2 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim11Q99PQ2 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim11Q99PQ2 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim11Q99PQ2 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim11Q99PQ2 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms