Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdh15Q99PJ1 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh15Q99PJ1 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh15Q99PJ1 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh15Q99PJ1 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh15Q99PJ1 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh15Q99PJ1 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh15Q99PJ1 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.31■□□□□ 0.2
Pcdh15Q99PJ1 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh15Q99PJ1 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh15Q99PJ1 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh15Q99PJ1 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdh15Q99PJ1 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC16.31■□□□□ 0.2
Pcdh15Q99PJ1 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC16.31■□□□□ 0.2
Pcdh15Q99PJ1 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Pcdh15Q99PJ1 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC16.31■□□□□ 0.2
Pcdh15Q99PJ1 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh15Q99PJ1 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh15Q99PJ1 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh15Q99PJ1 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh15Q99PJ1 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh15Q99PJ1 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdh15Q99PJ1 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh15Q99PJ1 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh15Q99PJ1 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh15Q99PJ1 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh15Q99PJ1 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh15Q99PJ1 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdh15Q99PJ1 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh15Q99PJ1 Mir7070-201ENSMUST00000183657 86 ntBASIC16.3■□□□□ 0.2
Pcdh15Q99PJ1 Gm43822-201ENSMUST00000200285 476 ntBASIC16.3■□□□□ 0.2
Pcdh15Q99PJ1 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16.3■□□□□ 0.2
Pcdh15Q99PJ1 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
Pcdh15Q99PJ1 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh15Q99PJ1 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh15Q99PJ1 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh15Q99PJ1 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh15Q99PJ1 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pcdh15Q99PJ1 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pcdh15Q99PJ1 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdh15Q99PJ1 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Pcdh15Q99PJ1 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh15Q99PJ1 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh15Q99PJ1 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh15Q99PJ1 Ankra2-208ENSMUST00000226100 1476 ntBASIC16.29■□□□□ 0.2
Pcdh15Q99PJ1 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pcdh15Q99PJ1 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh15Q99PJ1 Gm14730-201ENSMUST00000122378 1045 ntBASIC16.29■□□□□ 0.2
Pcdh15Q99PJ1 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh15Q99PJ1 Gm27501-201ENSMUST00000183599 107 ntBASIC16.29■□□□□ 0.2
Pcdh15Q99PJ1 Gm7498-201ENSMUST00000203282 1084 ntBASIC16.29■□□□□ 0.2
Pcdh15Q99PJ1 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.29■□□□□ 0.2
Pcdh15Q99PJ1 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh15Q99PJ1 AC102291.3-201ENSMUST00000226566 405 ntBASIC16.29■□□□□ 0.2
Pcdh15Q99PJ1 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh15Q99PJ1 Mir497b-201ENSMUST00000093601 125 ntBASIC16.29■□□□□ 0.2
Pcdh15Q99PJ1 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh15Q99PJ1 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh15Q99PJ1 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh15Q99PJ1 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.29■□□□□ 0.2
Pcdh15Q99PJ1 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pcdh15Q99PJ1 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh15Q99PJ1 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh15Q99PJ1 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh15Q99PJ1 Gm12203-201ENSMUST00000118235 598 ntBASIC16.29■□□□□ 0.2
Pcdh15Q99PJ1 Gm12209-201ENSMUST00000120089 596 ntBASIC16.29■□□□□ 0.2
Pcdh15Q99PJ1 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh15Q99PJ1 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC16.29■□□□□ 0.2
Pcdh15Q99PJ1 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Pcdh15Q99PJ1 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh15Q99PJ1 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pcdh15Q99PJ1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh15Q99PJ1 Gm37015-201ENSMUST00000192763 1521 ntBASIC16.29■□□□□ 0.2
Pcdh15Q99PJ1 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh15Q99PJ1 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh15Q99PJ1 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh15Q99PJ1 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh15Q99PJ1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Pcdh15Q99PJ1 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh15Q99PJ1 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.28■□□□□ 0.2
Pcdh15Q99PJ1 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh15Q99PJ1 Gm2639-201ENSMUST00000156881 1297 ntBASIC16.28■□□□□ 0.2
Pcdh15Q99PJ1 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC16.28■□□□□ 0.2
Pcdh15Q99PJ1 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh15Q99PJ1 Gm4271-201ENSMUST00000174444 973 ntBASIC16.28■□□□□ 0.2
Pcdh15Q99PJ1 Gm3786-201ENSMUST00000202659 378 ntBASIC16.28■□□□□ 0.2
Pcdh15Q99PJ1 Gm17823-201ENSMUST00000217830 1006 ntBASIC16.28■□□□□ 0.2
Pcdh15Q99PJ1 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh15Q99PJ1 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Pcdh15Q99PJ1 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh15Q99PJ1 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Pcdh15Q99PJ1 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
Pcdh15Q99PJ1 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pcdh15Q99PJ1 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Pcdh15Q99PJ1 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh15Q99PJ1 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh15Q99PJ1 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh15Q99PJ1 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Pcdh15Q99PJ1 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh15Q99PJ1 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms