Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Cdh23Q99PF4 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdh23Q99PF4 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdh23Q99PF4 Gm38002-201ENSMUST00000193255 180 ntBASIC14.71□□□□□ -0.05
Cdh23Q99PF4 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14.71□□□□□ -0.05
Cdh23Q99PF4 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdh23Q99PF4 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Cdh23Q99PF4 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
Cdh23Q99PF4 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdh23Q99PF4 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Cdh23Q99PF4 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Cdh23Q99PF4 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdh23Q99PF4 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdh23Q99PF4 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdh23Q99PF4 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.71□□□□□ -0.05
Cdh23Q99PF4 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdh23Q99PF4 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.71□□□□□ -0.05
Cdh23Q99PF4 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Cdh23Q99PF4 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdh23Q99PF4 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cdh23Q99PF4 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.71□□□□□ -0.05
Cdh23Q99PF4 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.71□□□□□ -0.05
Cdh23Q99PF4 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cdh23Q99PF4 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cdh23Q99PF4 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdh23Q99PF4 Gm38158-201ENSMUST00000194617 339 ntBASIC14.71□□□□□ -0.06
Cdh23Q99PF4 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.71□□□□□ -0.06
Cdh23Q99PF4 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cdh23Q99PF4 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cdh23Q99PF4 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
Cdh23Q99PF4 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cdh23Q99PF4 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Cdh23Q99PF4 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cdh23Q99PF4 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Cdh23Q99PF4 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh23Q99PF4 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.7□□□□□ -0.06
Cdh23Q99PF4 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.7□□□□□ -0.06
Cdh23Q99PF4 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh23Q99PF4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh23Q99PF4 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh23Q99PF4 Celf4-206ENSMUST00000224553 1729 ntBASIC14.7□□□□□ -0.06
Cdh23Q99PF4 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Cdh23Q99PF4 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh23Q99PF4 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh23Q99PF4 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh23Q99PF4 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh23Q99PF4 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Cdh23Q99PF4 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh23Q99PF4 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.7□□□□□ -0.06
Cdh23Q99PF4 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.7□□□□□ -0.06
Cdh23Q99PF4 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Cdh23Q99PF4 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh23Q99PF4 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh23Q99PF4 Gm43289-201ENSMUST00000200537 1475 ntBASIC14.7□□□□□ -0.06
Cdh23Q99PF4 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh23Q99PF4 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh23Q99PF4 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh23Q99PF4 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Cdh23Q99PF4 Gm15376-201ENSMUST00000122258 783 ntBASIC14.7□□□□□ -0.06
Cdh23Q99PF4 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.7□□□□□ -0.06
Cdh23Q99PF4 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Cdh23Q99PF4 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh23Q99PF4 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh23Q99PF4 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh23Q99PF4 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh23Q99PF4 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.69□□□□□ -0.06
Cdh23Q99PF4 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh23Q99PF4 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC14.69□□□□□ -0.06
Cdh23Q99PF4 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh23Q99PF4 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh23Q99PF4 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Cdh23Q99PF4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh23Q99PF4 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.69□□□□□ -0.06
Cdh23Q99PF4 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh23Q99PF4 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh23Q99PF4 Mir877-201ENSMUST00000104738 85 ntBASIC14.69□□□□□ -0.06
Cdh23Q99PF4 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh23Q99PF4 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Cdh23Q99PF4 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC14.69□□□□□ -0.06
Cdh23Q99PF4 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.69□□□□□ -0.06
Cdh23Q99PF4 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh23Q99PF4 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh23Q99PF4 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh23Q99PF4 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh23Q99PF4 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC14.69□□□□□ -0.06
Cdh23Q99PF4 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh23Q99PF4 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Cdh23Q99PF4 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.68□□□□□ -0.06
Cdh23Q99PF4 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.68□□□□□ -0.06
Cdh23Q99PF4 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.68□□□□□ -0.06
Cdh23Q99PF4 Gm27331-201ENSMUST00000183705 60 ntBASIC14.68□□□□□ -0.06
Cdh23Q99PF4 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.68□□□□□ -0.06
Cdh23Q99PF4 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh23Q99PF4 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.68□□□□□ -0.06
Cdh23Q99PF4 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.68□□□□□ -0.06
Cdh23Q99PF4 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cdh23Q99PF4 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.68□□□□□ -0.06
Cdh23Q99PF4 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh23Q99PF4 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh23Q99PF4 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms