Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col25a1Q99MQ5 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col25a1Q99MQ5 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col25a1Q99MQ5 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Col25a1Q99MQ5 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col25a1Q99MQ5 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Col25a1Q99MQ5 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC15.19■□□□□ 0.02
Col25a1Q99MQ5 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col25a1Q99MQ5 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col25a1Q99MQ5 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col25a1Q99MQ5 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col25a1Q99MQ5 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col25a1Q99MQ5 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Col25a1Q99MQ5 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col25a1Q99MQ5 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.19■□□□□ 0.02
Col25a1Q99MQ5 Gm15808-201ENSMUST00000119046 604 ntBASIC15.19■□□□□ 0.02
Col25a1Q99MQ5 Mir1897-201ENSMUST00000122581 272 ntBASIC15.19■□□□□ 0.02
Col25a1Q99MQ5 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC15.19■□□□□ 0.02
Col25a1Q99MQ5 Gm7584-201ENSMUST00000175829 940 ntBASIC15.19■□□□□ 0.02
Col25a1Q99MQ5 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC15.19■□□□□ 0.02
Col25a1Q99MQ5 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC15.19■□□□□ 0.02
Col25a1Q99MQ5 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col25a1Q99MQ5 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col25a1Q99MQ5 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Col25a1Q99MQ5 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col25a1Q99MQ5 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col25a1Q99MQ5 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col25a1Q99MQ5 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Col25a1Q99MQ5 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col25a1Q99MQ5 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Col25a1Q99MQ5 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col25a1Q99MQ5 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.18■□□□□ 0.02
Col25a1Q99MQ5 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col25a1Q99MQ5 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col25a1Q99MQ5 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Col25a1Q99MQ5 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col25a1Q99MQ5 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Col25a1Q99MQ5 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col25a1Q99MQ5 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col25a1Q99MQ5 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col25a1Q99MQ5 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col25a1Q99MQ5 Gm13350-201ENSMUST00000120519 479 ntBASIC15.18■□□□□ 0.02
Col25a1Q99MQ5 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col25a1Q99MQ5 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC15.18■□□□□ 0.02
Col25a1Q99MQ5 Gm9719-201ENSMUST00000162765 543 ntBASIC15.18■□□□□ 0.02
Col25a1Q99MQ5 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col25a1Q99MQ5 Gm21854-201ENSMUST00000179901 471 ntBASIC15.18■□□□□ 0.02
Col25a1Q99MQ5 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.18■□□□□ 0.02
Col25a1Q99MQ5 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Col25a1Q99MQ5 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.18■□□□□ 0.02
Col25a1Q99MQ5 Gm7993-201ENSMUST00000200970 1384 ntBASIC15.18■□□□□ 0.02
Col25a1Q99MQ5 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col25a1Q99MQ5 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col25a1Q99MQ5 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col25a1Q99MQ5 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col25a1Q99MQ5 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col25a1Q99MQ5 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col25a1Q99MQ5 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.18■□□□□ 0.02
Col25a1Q99MQ5 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Col25a1Q99MQ5 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col25a1Q99MQ5 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col25a1Q99MQ5 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col25a1Q99MQ5 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col25a1Q99MQ5 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col25a1Q99MQ5 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col25a1Q99MQ5 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col25a1Q99MQ5 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Col25a1Q99MQ5 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Col25a1Q99MQ5 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col25a1Q99MQ5 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col25a1Q99MQ5 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Col25a1Q99MQ5 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Col25a1Q99MQ5 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.17■□□□□ 0.02
Col25a1Q99MQ5 Ldha-ps-201ENSMUST00000119390 995 ntBASIC15.17■□□□□ 0.02
Col25a1Q99MQ5 Gm6244-201ENSMUST00000178732 841 ntBASIC15.17■□□□□ 0.02
Col25a1Q99MQ5 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.17■□□□□ 0.02
Col25a1Q99MQ5 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC15.17■□□□□ 0.02
Col25a1Q99MQ5 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col25a1Q99MQ5 Gm7067-201ENSMUST00000207698 1249 ntBASIC15.17■□□□□ 0.02
Col25a1Q99MQ5 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col25a1Q99MQ5 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col25a1Q99MQ5 Gm17383-201ENSMUST00000078739 1041 ntBASIC15.17■□□□□ 0.02
Col25a1Q99MQ5 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col25a1Q99MQ5 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col25a1Q99MQ5 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col25a1Q99MQ5 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Col25a1Q99MQ5 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col25a1Q99MQ5 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col25a1Q99MQ5 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col25a1Q99MQ5 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col25a1Q99MQ5 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col25a1Q99MQ5 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col25a1Q99MQ5 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms