Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.24■□□□□ 0.03
Cdk5rap3Q99LM2 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk5rap3Q99LM2 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk5rap3Q99LM2 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Cdk5rap3Q99LM2 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk5rap3Q99LM2 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Cdk5rap3Q99LM2 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cdk5rap3Q99LM2 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cdk5rap3Q99LM2 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk5rap3Q99LM2 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cdk5rap3Q99LM2 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk5rap3Q99LM2 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk5rap3Q99LM2 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk5rap3Q99LM2 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk5rap3Q99LM2 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk5rap3Q99LM2 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap3Q99LM2 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap3Q99LM2 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap3Q99LM2 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap3Q99LM2 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.23■□□□□ 0.03
Cdk5rap3Q99LM2 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap3Q99LM2 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap3Q99LM2 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Cdk5rap3Q99LM2 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap3Q99LM2 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
Cdk5rap3Q99LM2 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap3Q99LM2 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap3Q99LM2 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.23■□□□□ 0.03
Cdk5rap3Q99LM2 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap3Q99LM2 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Cdk5rap3Q99LM2 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.23■□□□□ 0.03
Cdk5rap3Q99LM2 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap3Q99LM2 Gm4899-201ENSMUST00000178708 719 ntBASIC15.23■□□□□ 0.03
Cdk5rap3Q99LM2 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.23■□□□□ 0.03
Cdk5rap3Q99LM2 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap3Q99LM2 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap3Q99LM2 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Cdk5rap3Q99LM2 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap3Q99LM2 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap3Q99LM2 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap3Q99LM2 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap3Q99LM2 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap3Q99LM2 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap3Q99LM2 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap3Q99LM2 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk5rap3Q99LM2 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
Cdk5rap3Q99LM2 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.22■□□□□ 0.03
Cdk5rap3Q99LM2 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Cdk5rap3Q99LM2 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.22■□□□□ 0.03
Cdk5rap3Q99LM2 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cdk5rap3Q99LM2 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk5rap3Q99LM2 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk5rap3Q99LM2 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk5rap3Q99LM2 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk5rap3Q99LM2 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk5rap3Q99LM2 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC15.22■□□□□ 0.03
Cdk5rap3Q99LM2 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk5rap3Q99LM2 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.22■□□□□ 0.03
Cdk5rap3Q99LM2 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk5rap3Q99LM2 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.22■□□□□ 0.03
Cdk5rap3Q99LM2 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.22■□□□□ 0.03
Cdk5rap3Q99LM2 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Cdk5rap3Q99LM2 Gm7862-201ENSMUST00000121461 292 ntBASIC15.22■□□□□ 0.03
Cdk5rap3Q99LM2 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.22■□□□□ 0.03
Cdk5rap3Q99LM2 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.22■□□□□ 0.03
Cdk5rap3Q99LM2 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.22■□□□□ 0.03
Cdk5rap3Q99LM2 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.22■□□□□ 0.03
Cdk5rap3Q99LM2 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
Cdk5rap3Q99LM2 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk5rap3Q99LM2 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cdk5rap3Q99LM2 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk5rap3Q99LM2 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cdk5rap3Q99LM2 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk5rap3Q99LM2 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk5rap3Q99LM2 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cdk5rap3Q99LM2 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk5rap3Q99LM2 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk5rap3Q99LM2 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.22■□□□□ 0.03
Cdk5rap3Q99LM2 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk5rap3Q99LM2 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk5rap3Q99LM2 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
Cdk5rap3Q99LM2 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Cdk5rap3Q99LM2 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.21■□□□□ 0.03
Cdk5rap3Q99LM2 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk5rap3Q99LM2 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk5rap3Q99LM2 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk5rap3Q99LM2 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk5rap3Q99LM2 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk5rap3Q99LM2 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk5rap3Q99LM2 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cdk5rap3Q99LM2 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk5rap3Q99LM2 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Cdk5rap3Q99LM2 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk5rap3Q99LM2 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk5rap3Q99LM2 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk5rap3Q99LM2 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk5rap3Q99LM2 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.21■□□□□ 0.03
Cdk5rap3Q99LM2 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.21■□□□□ 0.03
Cdk5rap3Q99LM2 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk5rap3Q99LM2 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms