Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf1Q99LC2 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf1Q99LC2 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf1Q99LC2 Gm4875-201ENSMUST00000118257 786 ntBASIC14.68□□□□□ -0.06
Cstf1Q99LC2 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.68□□□□□ -0.06
Cstf1Q99LC2 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.68□□□□□ -0.06
Cstf1Q99LC2 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.68□□□□□ -0.06
Cstf1Q99LC2 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf1Q99LC2 Gm42612-201ENSMUST00000197986 623 ntBASIC14.68□□□□□ -0.06
Cstf1Q99LC2 Gm43170-201ENSMUST00000199827 612 ntBASIC14.68□□□□□ -0.06
Cstf1Q99LC2 Gm46209-201ENSMUST00000217912 553 ntBASIC14.68□□□□□ -0.06
Cstf1Q99LC2 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf1Q99LC2 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf1Q99LC2 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf1Q99LC2 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf1Q99LC2 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.68□□□□□ -0.06
Cstf1Q99LC2 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
Cstf1Q99LC2 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf1Q99LC2 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf1Q99LC2 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf1Q99LC2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cstf1Q99LC2 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.68□□□□□ -0.06
Cstf1Q99LC2 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Mir6420-201ENSMUST00000185032 102 ntBASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Cstf1Q99LC2 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Gm6007-201ENSMUST00000208170 823 ntBASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Gm15823-201ENSMUST00000064305 670 ntBASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cstf1Q99LC2 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.67□□□□□ -0.06
Cstf1Q99LC2 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cstf1Q99LC2 Prob1-201ENSMUST00000097619 3021 ntBASIC14.66□□□□□ -0.06
Cstf1Q99LC2 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.66□□□□□ -0.06
Cstf1Q99LC2 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cstf1Q99LC2 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.66□□□□□ -0.06
Cstf1Q99LC2 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cstf1Q99LC2 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.66□□□□□ -0.06
Cstf1Q99LC2 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.66□□□□□ -0.06
Cstf1Q99LC2 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Cstf1Q99LC2 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Cstf1Q99LC2 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.66□□□□□ -0.06
Cstf1Q99LC2 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cstf1Q99LC2 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.66□□□□□ -0.06
Cstf1Q99LC2 Gm6266-201ENSMUST00000203844 806 ntBASIC14.66□□□□□ -0.06
Cstf1Q99LC2 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cstf1Q99LC2 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cstf1Q99LC2 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cstf1Q99LC2 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cstf1Q99LC2 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.66□□□□□ -0.06
Cstf1Q99LC2 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cstf1Q99LC2 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cstf1Q99LC2 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cstf1Q99LC2 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.66□□□□□ -0.06
Cstf1Q99LC2 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cstf1Q99LC2 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cstf1Q99LC2 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cstf1Q99LC2 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cstf1Q99LC2 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cstf1Q99LC2 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cstf1Q99LC2 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cstf1Q99LC2 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cstf1Q99LC2 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.65□□□□□ -0.06
Cstf1Q99LC2 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cstf1Q99LC2 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Cstf1Q99LC2 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.65□□□□□ -0.06
Cstf1Q99LC2 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.65□□□□□ -0.06
Cstf1Q99LC2 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cstf1Q99LC2 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms