Protein–RNA interactions for Protein: Q99JB8

Pacsin3, Protein kinase C and casein kinase II substrate protein 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pacsin3Q99JB8 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pacsin3Q99JB8 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pacsin3Q99JB8 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pacsin3Q99JB8 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pacsin3Q99JB8 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pacsin3Q99JB8 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pacsin3Q99JB8 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Pacsin3Q99JB8 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pacsin3Q99JB8 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pacsin3Q99JB8 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pacsin3Q99JB8 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pacsin3Q99JB8 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pacsin3Q99JB8 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pacsin3Q99JB8 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pacsin3Q99JB8 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Pacsin3Q99JB8 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pacsin3Q99JB8 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pacsin3Q99JB8 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Pacsin3Q99JB8 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pacsin3Q99JB8 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pacsin3Q99JB8 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pacsin3Q99JB8 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Pacsin3Q99JB8 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.33□□□□□ -0.12
Pacsin3Q99JB8 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.33□□□□□ -0.12
Pacsin3Q99JB8 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.33□□□□□ -0.12
Pacsin3Q99JB8 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pacsin3Q99JB8 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pacsin3Q99JB8 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pacsin3Q99JB8 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pacsin3Q99JB8 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pacsin3Q99JB8 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Pacsin3Q99JB8 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Pacsin3Q99JB8 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pacsin3Q99JB8 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 Gm13312-201ENSMUST00000119631 718 ntBASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 Gm18622-201ENSMUST00000219361 595 ntBASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pacsin3Q99JB8 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pacsin3Q99JB8 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pacsin3Q99JB8 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pacsin3Q99JB8 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pacsin3Q99JB8 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pacsin3Q99JB8 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pacsin3Q99JB8 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pacsin3Q99JB8 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Pacsin3Q99JB8 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.31□□□□□ -0.12
Pacsin3Q99JB8 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pacsin3Q99JB8 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pacsin3Q99JB8 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pacsin3Q99JB8 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pacsin3Q99JB8 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pacsin3Q99JB8 Gm24589-201ENSMUST00000116692 94 ntBASIC14.31□□□□□ -0.12
Pacsin3Q99JB8 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.31□□□□□ -0.12
Pacsin3Q99JB8 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pacsin3Q99JB8 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pacsin3Q99JB8 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.31□□□□□ -0.12
Pacsin3Q99JB8 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.31□□□□□ -0.12
Pacsin3Q99JB8 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.31□□□□□ -0.12
Pacsin3Q99JB8 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pacsin3Q99JB8 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pacsin3Q99JB8 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pacsin3Q99JB8 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pacsin3Q99JB8 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.31□□□□□ -0.12
Pacsin3Q99JB8 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pacsin3Q99JB8 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pacsin3Q99JB8 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms