Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.83□□□□□ -0.04
Cdk9Q99J95 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk9Q99J95 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Cdk9Q99J95 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.83□□□□□ -0.04
Cdk9Q99J95 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.83□□□□□ -0.04
Cdk9Q99J95 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.83□□□□□ -0.04
Cdk9Q99J95 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk9Q99J95 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk9Q99J95 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.83□□□□□ -0.04
Cdk9Q99J95 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk9Q99J95 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk9Q99J95 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk9Q99J95 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk9Q99J95 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk9Q99J95 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk9Q99J95 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk9Q99J95 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cdk9Q99J95 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk9Q99J95 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk9Q99J95 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk9Q99J95 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk9Q99J95 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk9Q99J95 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Cdk9Q99J95 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk9Q99J95 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk9Q99J95 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cdk9Q99J95 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.82□□□□□ -0.04
Cdk9Q99J95 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cdk9Q99J95 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk9Q99J95 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.82□□□□□ -0.04
Cdk9Q99J95 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.82□□□□□ -0.04
Cdk9Q99J95 Gm28033-201ENSMUST00000184224 96 ntBASIC14.82□□□□□ -0.04
Cdk9Q99J95 Gm18622-201ENSMUST00000219361 595 ntBASIC14.82□□□□□ -0.04
Cdk9Q99J95 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk9Q99J95 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk9Q99J95 Celf4-206ENSMUST00000224553 1729 ntBASIC14.82□□□□□ -0.04
Cdk9Q99J95 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Cdk9Q99J95 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk9Q99J95 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk9Q99J95 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk9Q99J95 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk9Q99J95 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.82□□□□□ -0.04
Cdk9Q99J95 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk9Q99J95 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Cdk9Q99J95 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk9Q99J95 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk9Q99J95 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
Cdk9Q99J95 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Cdk9Q99J95 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk9Q99J95 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk9Q99J95 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk9Q99J95 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk9Q99J95 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.82□□□□□ -0.04
Cdk9Q99J95 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Cdk9Q99J95 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk9Q99J95 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdk9Q99J95 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdk9Q99J95 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cdk9Q99J95 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdk9Q99J95 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdk9Q99J95 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdk9Q99J95 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.81□□□□□ -0.04
Cdk9Q99J95 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdk9Q99J95 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.81□□□□□ -0.04
Cdk9Q99J95 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.81□□□□□ -0.04
Cdk9Q99J95 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdk9Q99J95 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdk9Q99J95 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cdk9Q99J95 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdk9Q99J95 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Cdk9Q99J95 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdk9Q99J95 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.81□□□□□ -0.04
Cdk9Q99J95 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cdk9Q99J95 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdk9Q99J95 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Cdk9Q99J95 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdk9Q99J95 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdk9Q99J95 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdk9Q99J95 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cdk9Q99J95 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdk9Q99J95 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdk9Q99J95 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdk9Q99J95 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdk9Q99J95 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdk9Q99J95 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk9Q99J95 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk9Q99J95 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk9Q99J95 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk9Q99J95 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.8□□□□□ -0.04
Cdk9Q99J95 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk9Q99J95 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk9Q99J95 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk9Q99J95 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cdk9Q99J95 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cdk9Q99J95 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk9Q99J95 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk9Q99J95 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk9Q99J95 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk9Q99J95 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk9Q99J95 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms