Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfc4Q99J62 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfc4Q99J62 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.89■□□□□ 0.29
Rfc4Q99J62 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfc4Q99J62 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Rfc4Q99J62 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfc4Q99J62 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfc4Q99J62 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.89■□□□□ 0.29
Rfc4Q99J62 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rfc4Q99J62 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC16.89■□□□□ 0.29
Rfc4Q99J62 Gm45384-201ENSMUST00000210451 277 ntBASIC16.89■□□□□ 0.29
Rfc4Q99J62 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.89■□□□□ 0.29
Rfc4Q99J62 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfc4Q99J62 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfc4Q99J62 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfc4Q99J62 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfc4Q99J62 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
Rfc4Q99J62 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfc4Q99J62 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfc4Q99J62 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfc4Q99J62 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rfc4Q99J62 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfc4Q99J62 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Rfc4Q99J62 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.88■□□□□ 0.29
Rfc4Q99J62 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rfc4Q99J62 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.88■□□□□ 0.29
Rfc4Q99J62 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rfc4Q99J62 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC16.88■□□□□ 0.29
Rfc4Q99J62 Gm14042-201ENSMUST00000120139 833 ntBASIC16.88■□□□□ 0.29
Rfc4Q99J62 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rfc4Q99J62 Gm27631-201ENSMUST00000184163 466 ntBASIC16.88■□□□□ 0.29
Rfc4Q99J62 Gm42612-201ENSMUST00000197986 623 ntBASIC16.88■□□□□ 0.29
Rfc4Q99J62 Gm18018-201ENSMUST00000198273 408 ntBASIC16.88■□□□□ 0.29
Rfc4Q99J62 Gm43170-201ENSMUST00000199827 612 ntBASIC16.88■□□□□ 0.29
Rfc4Q99J62 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rfc4Q99J62 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfc4Q99J62 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfc4Q99J62 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfc4Q99J62 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rfc4Q99J62 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Rfc4Q99J62 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfc4Q99J62 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rfc4Q99J62 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rfc4Q99J62 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.88■□□□□ 0.29
Rfc4Q99J62 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfc4Q99J62 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfc4Q99J62 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.87■□□□□ 0.29
Rfc4Q99J62 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Rfc4Q99J62 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfc4Q99J62 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.87■□□□□ 0.29
Rfc4Q99J62 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.87■□□□□ 0.29
Rfc4Q99J62 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rfc4Q99J62 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfc4Q99J62 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfc4Q99J62 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfc4Q99J62 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfc4Q99J62 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC16.87■□□□□ 0.29
Rfc4Q99J62 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Rfc4Q99J62 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfc4Q99J62 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfc4Q99J62 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Rfc4Q99J62 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfc4Q99J62 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfc4Q99J62 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfc4Q99J62 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Rfc4Q99J62 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rfc4Q99J62 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc4Q99J62 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc4Q99J62 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.86■□□□□ 0.29
Rfc4Q99J62 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc4Q99J62 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc4Q99J62 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc4Q99J62 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.86■□□□□ 0.29
Rfc4Q99J62 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc4Q99J62 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc4Q99J62 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc4Q99J62 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc4Q99J62 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc4Q99J62 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc4Q99J62 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc4Q99J62 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc4Q99J62 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc4Q99J62 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc4Q99J62 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc4Q99J62 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc4Q99J62 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Rfc4Q99J62 Gm12091-201ENSMUST00000146791 830 ntBASIC16.86■□□□□ 0.29
Rfc4Q99J62 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Rfc4Q99J62 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.86■□□□□ 0.29
Rfc4Q99J62 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Rfc4Q99J62 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc4Q99J62 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Rfc4Q99J62 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc4Q99J62 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc4Q99J62 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.86■□□□□ 0.29
Rfc4Q99J62 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc4Q99J62 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc4Q99J62 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc4Q99J62 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc4Q99J62 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms