Protein–RNA interactions for Protein: Q99J19

Smim11a, Small integral membrane protein 11A, mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim11aQ99J19 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim11aQ99J19 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim11aQ99J19 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim11aQ99J19 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim11aQ99J19 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Smim11aQ99J19 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smim11aQ99J19 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim11aQ99J19 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Smim11aQ99J19 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim11aQ99J19 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim11aQ99J19 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim11aQ99J19 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim11aQ99J19 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim11aQ99J19 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Smim11aQ99J19 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Smim11aQ99J19 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim11aQ99J19 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Smim11aQ99J19 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim11aQ99J19 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim11aQ99J19 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smim11aQ99J19 Gm7222-201ENSMUST00000117512 906 ntBASIC14.42□□□□□ -0.1
Smim11aQ99J19 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Smim11aQ99J19 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Smim11aQ99J19 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smim11aQ99J19 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim11aQ99J19 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim11aQ99J19 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smim11aQ99J19 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim11aQ99J19 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim11aQ99J19 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim11aQ99J19 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smim11aQ99J19 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Smim11aQ99J19 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim11aQ99J19 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim11aQ99J19 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim11aQ99J19 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim11aQ99J19 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smim11aQ99J19 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smim11aQ99J19 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smim11aQ99J19 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Smim11aQ99J19 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smim11aQ99J19 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smim11aQ99J19 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Smim11aQ99J19 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smim11aQ99J19 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Smim11aQ99J19 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smim11aQ99J19 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Smim11aQ99J19 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Smim11aQ99J19 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Smim11aQ99J19 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.41□□□□□ -0.1
Smim11aQ99J19 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.41□□□□□ -0.1
Smim11aQ99J19 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smim11aQ99J19 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smim11aQ99J19 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smim11aQ99J19 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.41□□□□□ -0.1
Smim11aQ99J19 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smim11aQ99J19 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smim11aQ99J19 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Smim11aQ99J19 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smim11aQ99J19 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smim11aQ99J19 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smim11aQ99J19 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smim11aQ99J19 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smim11aQ99J19 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smim11aQ99J19 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.41□□□□□ -0.1
Smim11aQ99J19 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smim11aQ99J19 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smim11aQ99J19 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smim11aQ99J19 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smim11aQ99J19 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smim11aQ99J19 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smim11aQ99J19 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smim11aQ99J19 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smim11aQ99J19 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Smim11aQ99J19 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Smim11aQ99J19 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.4□□□□□ -0.1
Smim11aQ99J19 Gm11764-201ENSMUST00000120221 623 ntBASIC14.4□□□□□ -0.1
Smim11aQ99J19 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.4□□□□□ -0.1
Smim11aQ99J19 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smim11aQ99J19 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smim11aQ99J19 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.4□□□□□ -0.1
Smim11aQ99J19 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smim11aQ99J19 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.4□□□□□ -0.1
Smim11aQ99J19 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smim11aQ99J19 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.4□□□□□ -0.1
Smim11aQ99J19 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.4□□□□□ -0.1
Smim11aQ99J19 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smim11aQ99J19 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.4□□□□□ -0.1
Smim11aQ99J19 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smim11aQ99J19 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Smim11aQ99J19 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smim11aQ99J19 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smim11aQ99J19 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smim11aQ99J19 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smim11aQ99J19 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Smim11aQ99J19 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smim11aQ99J19 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smim11aQ99J19 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smim11aQ99J19 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smim11aQ99J19 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms