Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 Ighv1-25-201ENSMUST00000195638 345 ntBASIC17.58■□□□□ 0.4
Sf3b3Q921M3 AC153872.1-201ENSMUST00000199539 128 ntBASIC17.58■□□□□ 0.4
Sf3b3Q921M3 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sf3b3Q921M3 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.58■□□□□ 0.4
Sf3b3Q921M3 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sf3b3Q921M3 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sf3b3Q921M3 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3b3Q921M3 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3b3Q921M3 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3b3Q921M3 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3b3Q921M3 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3b3Q921M3 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3b3Q921M3 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3b3Q921M3 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3b3Q921M3 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3b3Q921M3 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Sf3b3Q921M3 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3b3Q921M3 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Sf3b3Q921M3 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3b3Q921M3 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC17.57■□□□□ 0.4
Sf3b3Q921M3 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC17.57■□□□□ 0.4
Sf3b3Q921M3 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3b3Q921M3 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Sf3b3Q921M3 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3b3Q921M3 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC17.57■□□□□ 0.4
Sf3b3Q921M3 Gm45384-201ENSMUST00000210451 277 ntBASIC17.57■□□□□ 0.4
Sf3b3Q921M3 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC17.57■□□□□ 0.4
Sf3b3Q921M3 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3b3Q921M3 AC154806.6-201ENSMUST00000228192 202 ntBASIC17.57■□□□□ 0.4
Sf3b3Q921M3 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3b3Q921M3 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3b3Q921M3 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3b3Q921M3 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3b3Q921M3 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.57■□□□□ 0.4
Sf3b3Q921M3 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3b3Q921M3 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Sf3b3Q921M3 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3b3Q921M3 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3b3Q921M3 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3b3Q921M3 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3b3Q921M3 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.56■□□□□ 0.4
Sf3b3Q921M3 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3b3Q921M3 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3b3Q921M3 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC17.56■□□□□ 0.4
Sf3b3Q921M3 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3b3Q921M3 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3b3Q921M3 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3b3Q921M3 Gm14127-201ENSMUST00000117906 678 ntBASIC17.56■□□□□ 0.4
Sf3b3Q921M3 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC17.56■□□□□ 0.4
Sf3b3Q921M3 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Sf3b3Q921M3 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3b3Q921M3 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3b3Q921M3 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3b3Q921M3 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Sf3b3Q921M3 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Sf3b3Q921M3 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3b3Q921M3 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3b3Q921M3 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3b3Q921M3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Sf3b3Q921M3 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sf3b3Q921M3 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sf3b3Q921M3 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sf3b3Q921M3 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sf3b3Q921M3 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.55■□□□□ 0.4
Sf3b3Q921M3 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sf3b3Q921M3 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC17.55■□□□□ 0.4
Sf3b3Q921M3 Ldha-ps-201ENSMUST00000119390 995 ntBASIC17.55■□□□□ 0.4
Sf3b3Q921M3 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC17.55■□□□□ 0.4
Sf3b3Q921M3 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC17.55■□□□□ 0.4
Sf3b3Q921M3 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sf3b3Q921M3 AC154687.2-201ENSMUST00000223853 640 ntBASIC17.55■□□□□ 0.4
Sf3b3Q921M3 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sf3b3Q921M3 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.55■□□□□ 0.4
Sf3b3Q921M3 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Sf3b3Q921M3 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Sf3b3Q921M3 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sf3b3Q921M3 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b3Q921M3 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b3Q921M3 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.54■□□□□ 0.4
Sf3b3Q921M3 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b3Q921M3 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b3Q921M3 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b3Q921M3 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Sf3b3Q921M3 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b3Q921M3 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b3Q921M3 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b3Q921M3 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b3Q921M3 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b3Q921M3 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC17.54■□□□□ 0.4
Sf3b3Q921M3 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC17.54■□□□□ 0.4
Sf3b3Q921M3 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC17.54■□□□□ 0.4
Sf3b3Q921M3 Gm43433-201ENSMUST00000196573 481 ntBASIC17.54■□□□□ 0.4
Sf3b3Q921M3 Gm45059-201ENSMUST00000205558 1077 ntBASIC17.54■□□□□ 0.4
Sf3b3Q921M3 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Sf3b3Q921M3 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b3Q921M3 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b3Q921M3 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b3Q921M3 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b3Q921M3 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b3Q921M3 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms