Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smc1bQ920F6 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.98■□□□□ 0.31
Smc1bQ920F6 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.98■□□□□ 0.31
Smc1bQ920F6 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC16.98■□□□□ 0.31
Smc1bQ920F6 Mir7684-201ENSMUST00000183858 60 ntBASIC16.98■□□□□ 0.31
Smc1bQ920F6 Gm17837-201ENSMUST00000186435 985 ntBASIC16.98■□□□□ 0.31
Smc1bQ920F6 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Smc1bQ920F6 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.98■□□□□ 0.31
Smc1bQ920F6 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc1bQ920F6 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smc1bQ920F6 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc1bQ920F6 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc1bQ920F6 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc1bQ920F6 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc1bQ920F6 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc1bQ920F6 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.98■□□□□ 0.31
Smc1bQ920F6 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.98■□□□□ 0.31
Smc1bQ920F6 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc1bQ920F6 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Smc1bQ920F6 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc1bQ920F6 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smc1bQ920F6 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smc1bQ920F6 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smc1bQ920F6 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Smc1bQ920F6 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1bQ920F6 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.97■□□□□ 0.31
Smc1bQ920F6 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1bQ920F6 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Smc1bQ920F6 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1bQ920F6 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1bQ920F6 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1bQ920F6 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Smc1bQ920F6 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1bQ920F6 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1bQ920F6 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1bQ920F6 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1bQ920F6 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.97■□□□□ 0.31
Smc1bQ920F6 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Smc1bQ920F6 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.97■□□□□ 0.31
Smc1bQ920F6 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1bQ920F6 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Smc1bQ920F6 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.97■□□□□ 0.31
Smc1bQ920F6 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1bQ920F6 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1bQ920F6 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1bQ920F6 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1bQ920F6 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1bQ920F6 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1bQ920F6 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1bQ920F6 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1bQ920F6 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Smc1bQ920F6 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1bQ920F6 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1bQ920F6 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1bQ920F6 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1bQ920F6 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1bQ920F6 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1bQ920F6 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smc1bQ920F6 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Smc1bQ920F6 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Smc1bQ920F6 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smc1bQ920F6 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smc1bQ920F6 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smc1bQ920F6 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Smc1bQ920F6 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smc1bQ920F6 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smc1bQ920F6 Gm6415-201ENSMUST00000118488 348 ntBASIC16.96■□□□□ 0.31
Smc1bQ920F6 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.96■□□□□ 0.31
Smc1bQ920F6 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Smc1bQ920F6 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Smc1bQ920F6 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Smc1bQ920F6 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Smc1bQ920F6 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Smc1bQ920F6 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.96■□□□□ 0.31
Smc1bQ920F6 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smc1bQ920F6 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smc1bQ920F6 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.96■□□□□ 0.31
Smc1bQ920F6 Gm10154-201ENSMUST00000084445 354 ntBASIC16.96■□□□□ 0.31
Smc1bQ920F6 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Smc1bQ920F6 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Smc1bQ920F6 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smc1bQ920F6 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smc1bQ920F6 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.96■□□□□ 0.31
Smc1bQ920F6 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Smc1bQ920F6 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Smc1bQ920F6 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
Smc1bQ920F6 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Smc1bQ920F6 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Smc1bQ920F6 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smc1bQ920F6 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smc1bQ920F6 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smc1bQ920F6 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.95■□□□□ 0.3
Smc1bQ920F6 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smc1bQ920F6 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smc1bQ920F6 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smc1bQ920F6 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smc1bQ920F6 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smc1bQ920F6 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smc1bQ920F6 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smc1bQ920F6 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms