Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha2Q91Y17 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.63■□□□□ 0.09
Pcdha2Q91Y17 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha2Q91Y17 Mir449b-201ENSMUST00000104833 80 ntBASIC15.63■□□□□ 0.09
Pcdha2Q91Y17 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.63■□□□□ 0.09
Pcdha2Q91Y17 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.63■□□□□ 0.09
Pcdha2Q91Y17 Gm23547-201ENSMUST00000158210 271 ntBASIC15.63■□□□□ 0.09
Pcdha2Q91Y17 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.63■□□□□ 0.09
Pcdha2Q91Y17 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Pcdha2Q91Y17 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha2Q91Y17 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha2Q91Y17 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha2Q91Y17 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha2Q91Y17 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.63■□□□□ 0.09
Pcdha2Q91Y17 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Pcdha2Q91Y17 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Pcdha2Q91Y17 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Pcdha2Q91Y17 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha2Q91Y17 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Pcdha2Q91Y17 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha2Q91Y17 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha2Q91Y17 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
Pcdha2Q91Y17 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha2Q91Y17 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha2Q91Y17 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha2Q91Y17 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.63■□□□□ 0.09
Pcdha2Q91Y17 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.63■□□□□ 0.09
Pcdha2Q91Y17 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.63■□□□□ 0.09
Pcdha2Q91Y17 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha2Q91Y17 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha2Q91Y17 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha2Q91Y17 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha2Q91Y17 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha2Q91Y17 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.62■□□□□ 0.09
Pcdha2Q91Y17 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha2Q91Y17 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdha2Q91Y17 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdha2Q91Y17 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha2Q91Y17 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha2Q91Y17 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha2Q91Y17 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha2Q91Y17 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha2Q91Y17 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.62■□□□□ 0.09
Pcdha2Q91Y17 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Pcdha2Q91Y17 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
Pcdha2Q91Y17 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.62■□□□□ 0.09
Pcdha2Q91Y17 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha2Q91Y17 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha2Q91Y17 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha2Q91Y17 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha2Q91Y17 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha2Q91Y17 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha2Q91Y17 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha2Q91Y17 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Pcdha2Q91Y17 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha2Q91Y17 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdha2Q91Y17 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Pcdha2Q91Y17 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha2Q91Y17 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Pcdha2Q91Y17 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha2Q91Y17 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha2Q91Y17 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Pcdha2Q91Y17 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Pcdha2Q91Y17 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.61■□□□□ 0.09
Pcdha2Q91Y17 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.61■□□□□ 0.09
Pcdha2Q91Y17 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha2Q91Y17 Gm24158-201ENSMUST00000175263 71 ntBASIC15.61■□□□□ 0.09
Pcdha2Q91Y17 Gm9824-201ENSMUST00000178707 561 ntBASIC15.61■□□□□ 0.09
Pcdha2Q91Y17 Gm10253-201ENSMUST00000194270 940 ntBASIC15.61■□□□□ 0.09
Pcdha2Q91Y17 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha2Q91Y17 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha2Q91Y17 Gm18049-201ENSMUST00000208909 581 ntBASIC15.61■□□□□ 0.09
Pcdha2Q91Y17 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha2Q91Y17 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha2Q91Y17 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha2Q91Y17 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdha2Q91Y17 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha2Q91Y17 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha2Q91Y17 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha2Q91Y17 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha2Q91Y17 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha2Q91Y17 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha2Q91Y17 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Pcdha2Q91Y17 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha2Q91Y17 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha2Q91Y17 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha2Q91Y17 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha2Q91Y17 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha2Q91Y17 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdha2Q91Y17 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha2Q91Y17 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha2Q91Y17 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Pcdha2Q91Y17 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdha2Q91Y17 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.6■□□□□ 0.09
Pcdha2Q91Y17 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.6■□□□□ 0.09
Pcdha2Q91Y17 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.6■□□□□ 0.09
Pcdha2Q91Y17 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha2Q91Y17 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdha2Q91Y17 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdha2Q91Y17 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms