Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb1Q91Y08 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb1Q91Y08 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb1Q91Y08 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Pcdhb1Q91Y08 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb1Q91Y08 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Pcdhb1Q91Y08 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb1Q91Y08 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.27■□□□□ 0.04
Pcdhb1Q91Y08 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.27■□□□□ 0.04
Pcdhb1Q91Y08 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Pcdhb1Q91Y08 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb1Q91Y08 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb1Q91Y08 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb1Q91Y08 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb1Q91Y08 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Pcdhb1Q91Y08 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb1Q91Y08 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb1Q91Y08 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb1Q91Y08 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb1Q91Y08 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb1Q91Y08 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.27■□□□□ 0.03
Pcdhb1Q91Y08 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb1Q91Y08 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb1Q91Y08 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb1Q91Y08 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb1Q91Y08 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Pcdhb1Q91Y08 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Pcdhb1Q91Y08 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb1Q91Y08 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb1Q91Y08 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb1Q91Y08 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb1Q91Y08 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb1Q91Y08 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb1Q91Y08 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb1Q91Y08 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb1Q91Y08 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb1Q91Y08 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Pcdhb1Q91Y08 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb1Q91Y08 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb1Q91Y08 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb1Q91Y08 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb1Q91Y08 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdhb1Q91Y08 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Pcdhb1Q91Y08 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb1Q91Y08 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.26■□□□□ 0.03
Pcdhb1Q91Y08 Gm25925-201ENSMUST00000158314 306 ntBASIC15.26■□□□□ 0.03
Pcdhb1Q91Y08 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdhb1Q91Y08 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.26■□□□□ 0.03
Pcdhb1Q91Y08 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdhb1Q91Y08 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.26■□□□□ 0.03
Pcdhb1Q91Y08 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdhb1Q91Y08 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdhb1Q91Y08 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.26■□□□□ 0.03
Pcdhb1Q91Y08 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.26■□□□□ 0.03
Pcdhb1Q91Y08 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb1Q91Y08 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb1Q91Y08 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb1Q91Y08 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb1Q91Y08 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb1Q91Y08 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb1Q91Y08 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb1Q91Y08 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb1Q91Y08 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb1Q91Y08 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb1Q91Y08 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Pcdhb1Q91Y08 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb1Q91Y08 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhb1Q91Y08 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb1Q91Y08 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb1Q91Y08 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb1Q91Y08 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.25■□□□□ 0.03
Pcdhb1Q91Y08 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Pcdhb1Q91Y08 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb1Q91Y08 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb1Q91Y08 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb1Q91Y08 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhb1Q91Y08 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb1Q91Y08 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhb1Q91Y08 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhb1Q91Y08 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb1Q91Y08 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb1Q91Y08 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdhb1Q91Y08 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhb1Q91Y08 Mir3113-201ENSMUST00000175478 76 ntBASIC15.25■□□□□ 0.03
Pcdhb1Q91Y08 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb1Q91Y08 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb1Q91Y08 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb1Q91Y08 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.25■□□□□ 0.03
Pcdhb1Q91Y08 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb1Q91Y08 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdhb1Q91Y08 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdhb1Q91Y08 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb1Q91Y08 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb1Q91Y08 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb1Q91Y08 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb1Q91Y08 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.24■□□□□ 0.03
Pcdhb1Q91Y08 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.24■□□□□ 0.03
Pcdhb1Q91Y08 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb1Q91Y08 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb1Q91Y08 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms