Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb18Q91Y02 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb18Q91Y02 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.37■□□□□ 0.05
Pcdhb18Q91Y02 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb18Q91Y02 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb18Q91Y02 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhb18Q91Y02 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb18Q91Y02 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb18Q91Y02 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb18Q91Y02 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb18Q91Y02 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb18Q91Y02 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb18Q91Y02 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb18Q91Y02 Gm5745-201ENSMUST00000183748 313 ntBASIC15.37■□□□□ 0.05
Pcdhb18Q91Y02 Gm18766-201ENSMUST00000189811 808 ntBASIC15.37■□□□□ 0.05
Pcdhb18Q91Y02 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb18Q91Y02 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb18Q91Y02 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhb18Q91Y02 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb18Q91Y02 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb18Q91Y02 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb18Q91Y02 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb18Q91Y02 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb18Q91Y02 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb18Q91Y02 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb18Q91Y02 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhb18Q91Y02 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.37■□□□□ 0.05
Pcdhb18Q91Y02 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb18Q91Y02 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb18Q91Y02 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb18Q91Y02 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb18Q91Y02 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb18Q91Y02 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb18Q91Y02 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb18Q91Y02 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb18Q91Y02 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb18Q91Y02 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb18Q91Y02 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb18Q91Y02 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb18Q91Y02 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb18Q91Y02 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.36■□□□□ 0.05
Pcdhb18Q91Y02 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb18Q91Y02 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdhb18Q91Y02 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.36■□□□□ 0.05
Pcdhb18Q91Y02 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdhb18Q91Y02 Gm28630-201ENSMUST00000187806 498 ntBASIC15.36■□□□□ 0.05
Pcdhb18Q91Y02 Gm43767-201ENSMUST00000198933 381 ntBASIC15.36■□□□□ 0.05
Pcdhb18Q91Y02 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.36■□□□□ 0.05
Pcdhb18Q91Y02 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb18Q91Y02 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb18Q91Y02 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb18Q91Y02 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb18Q91Y02 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb18Q91Y02 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb18Q91Y02 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.36■□□□□ 0.05
Pcdhb18Q91Y02 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.36■□□□□ 0.05
Pcdhb18Q91Y02 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb18Q91Y02 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb18Q91Y02 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb18Q91Y02 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdhb18Q91Y02 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb18Q91Y02 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb18Q91Y02 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb18Q91Y02 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb18Q91Y02 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Pcdhb18Q91Y02 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb18Q91Y02 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb18Q91Y02 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhb18Q91Y02 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb18Q91Y02 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb18Q91Y02 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb18Q91Y02 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb18Q91Y02 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb18Q91Y02 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhb18Q91Y02 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb18Q91Y02 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb18Q91Y02 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdhb18Q91Y02 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb18Q91Y02 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb18Q91Y02 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.35■□□□□ 0.05
Pcdhb18Q91Y02 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhb18Q91Y02 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Pcdhb18Q91Y02 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb18Q91Y02 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb18Q91Y02 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb18Q91Y02 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb18Q91Y02 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Pcdhb18Q91Y02 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb18Q91Y02 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.35■□□□□ 0.05
Pcdhb18Q91Y02 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb18Q91Y02 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb18Q91Y02 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb18Q91Y02 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb18Q91Y02 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb18Q91Y02 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb18Q91Y02 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb18Q91Y02 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb18Q91Y02 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb18Q91Y02 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb18Q91Y02 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms