Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb20Q91XZ9 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb20Q91XZ9 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.38□□□□□ -0.11
Pcdhb20Q91XZ9 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Pcdhb20Q91XZ9 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb20Q91XZ9 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.38□□□□□ -0.11
Pcdhb20Q91XZ9 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb20Q91XZ9 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb20Q91XZ9 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdhb20Q91XZ9 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb20Q91XZ9 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb20Q91XZ9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb20Q91XZ9 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Tcrg-V1-201ENSMUST00000103564 374 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Ctcflos-203ENSMUST00000144256 1237 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 2310040G07Rik-202ENSMUST00000145897 462 ntTSL 3 BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Gm22764-201ENSMUST00000158370 92 ntBASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Gm36966-201ENSMUST00000192217 413 ntBASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Gm44958-201ENSMUST00000203734 736 ntBASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 AC132384.6-201ENSMUST00000218976 1206 ntBASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 AC122539.3-201ENSMUST00000218355 1431 ntBASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb20Q91XZ9 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 A230072E10Rik-201ENSMUST00000146161 676 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 Gm16026-204ENSMUST00000162652 683 ntBASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 Gm19253-201ENSMUST00000204279 307 ntBASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 Gm18871-201ENSMUST00000218655 745 ntBASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 Chchd1-203ENSMUST00000224633 557 ntBASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb20Q91XZ9 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb20Q91XZ9 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb20Q91XZ9 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhb20Q91XZ9 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms