Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb3Q91XZ7 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb3Q91XZ7 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb3Q91XZ7 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.74□□□□□ -0.05
Pcdhb3Q91XZ7 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.74□□□□□ -0.05
Pcdhb3Q91XZ7 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb3Q91XZ7 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.74□□□□□ -0.05
Pcdhb3Q91XZ7 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb3Q91XZ7 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
Pcdhb3Q91XZ7 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.74□□□□□ -0.05
Pcdhb3Q91XZ7 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb3Q91XZ7 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.74□□□□□ -0.05
Pcdhb3Q91XZ7 AC125117.2-201ENSMUST00000228344 1140 ntBASIC14.74□□□□□ -0.05
Pcdhb3Q91XZ7 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.74□□□□□ -0.05
Pcdhb3Q91XZ7 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Pcdhb3Q91XZ7 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb3Q91XZ7 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.74□□□□□ -0.05
Pcdhb3Q91XZ7 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.74□□□□□ -0.05
Pcdhb3Q91XZ7 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb3Q91XZ7 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb3Q91XZ7 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb3Q91XZ7 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb3Q91XZ7 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb3Q91XZ7 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb3Q91XZ7 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb3Q91XZ7 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.74□□□□□ -0.05
Pcdhb3Q91XZ7 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb3Q91XZ7 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb3Q91XZ7 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb3Q91XZ7 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb3Q91XZ7 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.73□□□□□ -0.05
Pcdhb3Q91XZ7 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb3Q91XZ7 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb3Q91XZ7 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.73□□□□□ -0.05
Pcdhb3Q91XZ7 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Pcdhb3Q91XZ7 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb3Q91XZ7 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Pcdhb3Q91XZ7 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb3Q91XZ7 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.73□□□□□ -0.05
Pcdhb3Q91XZ7 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.73□□□□□ -0.05
Pcdhb3Q91XZ7 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb3Q91XZ7 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb3Q91XZ7 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb3Q91XZ7 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb3Q91XZ7 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb3Q91XZ7 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
Pcdhb3Q91XZ7 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb3Q91XZ7 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb3Q91XZ7 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb3Q91XZ7 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb3Q91XZ7 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb3Q91XZ7 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Pcdhb3Q91XZ7 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb3Q91XZ7 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.72□□□□□ -0.05
Pcdhb3Q91XZ7 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb3Q91XZ7 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb3Q91XZ7 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb3Q91XZ7 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Pcdhb3Q91XZ7 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Pcdhb3Q91XZ7 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.72□□□□□ -0.05
Pcdhb3Q91XZ7 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.72□□□□□ -0.05
Pcdhb3Q91XZ7 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb3Q91XZ7 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb3Q91XZ7 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.72□□□□□ -0.05
Pcdhb3Q91XZ7 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Pcdhb3Q91XZ7 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb3Q91XZ7 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.72□□□□□ -0.05
Pcdhb3Q91XZ7 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb3Q91XZ7 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.72□□□□□ -0.05
Pcdhb3Q91XZ7 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.72□□□□□ -0.05
Pcdhb3Q91XZ7 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.72□□□□□ -0.05
Pcdhb3Q91XZ7 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Pcdhb3Q91XZ7 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.72□□□□□ -0.05
Pcdhb3Q91XZ7 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.72□□□□□ -0.05
Pcdhb3Q91XZ7 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb3Q91XZ7 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb3Q91XZ7 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb3Q91XZ7 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb3Q91XZ7 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb3Q91XZ7 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb3Q91XZ7 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb3Q91XZ7 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb3Q91XZ7 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb3Q91XZ7 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Pcdhb3Q91XZ7 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Pcdhb3Q91XZ7 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Pcdhb3Q91XZ7 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb3Q91XZ7 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.72□□□□□ -0.05
Pcdhb3Q91XZ7 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhb3Q91XZ7 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.72□□□□□ -0.05
Pcdhb3Q91XZ7 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
Pcdhb3Q91XZ7 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb3Q91XZ7 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
Pcdhb3Q91XZ7 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb3Q91XZ7 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb3Q91XZ7 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
Pcdhb3Q91XZ7 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb3Q91XZ7 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb3Q91XZ7 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhb3Q91XZ7 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms