Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb4Q91XZ6 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb4Q91XZ6 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.63□□□□□ -0.07
Pcdhb4Q91XZ6 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb4Q91XZ6 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb4Q91XZ6 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb4Q91XZ6 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb4Q91XZ6 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb4Q91XZ6 Gm13884-201ENSMUST00000118103 829 ntBASIC14.63□□□□□ -0.07
Pcdhb4Q91XZ6 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.63□□□□□ -0.07
Pcdhb4Q91XZ6 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Pcdhb4Q91XZ6 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdhb4Q91XZ6 AV026068-213ENSMUST00000223675 1171 ntBASIC14.63□□□□□ -0.07
Pcdhb4Q91XZ6 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb4Q91XZ6 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb4Q91XZ6 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb4Q91XZ6 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.63□□□□□ -0.07
Pcdhb4Q91XZ6 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdhb4Q91XZ6 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb4Q91XZ6 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb4Q91XZ6 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb4Q91XZ6 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb4Q91XZ6 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb4Q91XZ6 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhb4Q91XZ6 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb4Q91XZ6 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb4Q91XZ6 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb4Q91XZ6 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb4Q91XZ6 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.62□□□□□ -0.07
Pcdhb4Q91XZ6 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhb4Q91XZ6 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb4Q91XZ6 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb4Q91XZ6 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.62□□□□□ -0.07
Pcdhb4Q91XZ6 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.62□□□□□ -0.07
Pcdhb4Q91XZ6 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhb4Q91XZ6 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb4Q91XZ6 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdhb4Q91XZ6 Gm4899-201ENSMUST00000178708 719 ntBASIC14.62□□□□□ -0.07
Pcdhb4Q91XZ6 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.62□□□□□ -0.07
Pcdhb4Q91XZ6 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb4Q91XZ6 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb4Q91XZ6 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb4Q91XZ6 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb4Q91XZ6 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb4Q91XZ6 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb4Q91XZ6 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.62□□□□□ -0.07
Pcdhb4Q91XZ6 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhb4Q91XZ6 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb4Q91XZ6 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb4Q91XZ6 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb4Q91XZ6 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb4Q91XZ6 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb4Q91XZ6 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb4Q91XZ6 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb4Q91XZ6 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb4Q91XZ6 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb4Q91XZ6 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.61□□□□□ -0.07
Pcdhb4Q91XZ6 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb4Q91XZ6 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb4Q91XZ6 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb4Q91XZ6 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb4Q91XZ6 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb4Q91XZ6 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb4Q91XZ6 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb4Q91XZ6 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb4Q91XZ6 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdhb4Q91XZ6 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Pcdhb4Q91XZ6 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb4Q91XZ6 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb4Q91XZ6 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb4Q91XZ6 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb4Q91XZ6 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdhb4Q91XZ6 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb4Q91XZ6 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdhb4Q91XZ6 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb4Q91XZ6 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdhb4Q91XZ6 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Pcdhb4Q91XZ6 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb4Q91XZ6 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb4Q91XZ6 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb4Q91XZ6 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb4Q91XZ6 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb4Q91XZ6 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb4Q91XZ6 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb4Q91XZ6 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.61□□□□□ -0.07
Pcdhb4Q91XZ6 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb4Q91XZ6 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb4Q91XZ6 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb4Q91XZ6 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb4Q91XZ6 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdhb4Q91XZ6 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb4Q91XZ6 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb4Q91XZ6 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhb4Q91XZ6 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb4Q91XZ6 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb4Q91XZ6 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb4Q91XZ6 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb4Q91XZ6 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb4Q91XZ6 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms