Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb8Q91XZ2 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb8Q91XZ2 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.38□□□□□ -0.11
Pcdhb8Q91XZ2 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.38□□□□□ -0.11
Pcdhb8Q91XZ2 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.38□□□□□ -0.11
Pcdhb8Q91XZ2 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb8Q91XZ2 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb8Q91XZ2 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdhb8Q91XZ2 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb8Q91XZ2 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb8Q91XZ2 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb8Q91XZ2 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb8Q91XZ2 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb8Q91XZ2 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb8Q91XZ2 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb8Q91XZ2 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb8Q91XZ2 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb8Q91XZ2 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb8Q91XZ2 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb8Q91XZ2 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb8Q91XZ2 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdhb8Q91XZ2 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb8Q91XZ2 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb8Q91XZ2 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
Pcdhb8Q91XZ2 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb8Q91XZ2 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.37□□□□□ -0.11
Pcdhb8Q91XZ2 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb8Q91XZ2 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb8Q91XZ2 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb8Q91XZ2 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb8Q91XZ2 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb8Q91XZ2 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb8Q91XZ2 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhb8Q91XZ2 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb8Q91XZ2 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdhb8Q91XZ2 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.37□□□□□ -0.11
Pcdhb8Q91XZ2 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.37□□□□□ -0.11
Pcdhb8Q91XZ2 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb8Q91XZ2 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb8Q91XZ2 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb8Q91XZ2 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb8Q91XZ2 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb8Q91XZ2 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb8Q91XZ2 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb8Q91XZ2 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb8Q91XZ2 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb8Q91XZ2 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb8Q91XZ2 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb8Q91XZ2 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb8Q91XZ2 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb8Q91XZ2 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhb8Q91XZ2 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb8Q91XZ2 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb8Q91XZ2 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Pcdhb8Q91XZ2 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb8Q91XZ2 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb8Q91XZ2 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb8Q91XZ2 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb8Q91XZ2 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb8Q91XZ2 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb8Q91XZ2 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb8Q91XZ2 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb8Q91XZ2 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.36□□□□□ -0.11
Pcdhb8Q91XZ2 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb8Q91XZ2 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb8Q91XZ2 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb8Q91XZ2 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb8Q91XZ2 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb8Q91XZ2 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb8Q91XZ2 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.36□□□□□ -0.11
Pcdhb8Q91XZ2 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhb8Q91XZ2 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb8Q91XZ2 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pcdhb8Q91XZ2 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb8Q91XZ2 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.35□□□□□ -0.11
Pcdhb8Q91XZ2 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb8Q91XZ2 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb8Q91XZ2 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb8Q91XZ2 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.35□□□□□ -0.11
Pcdhb8Q91XZ2 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.35□□□□□ -0.11
Pcdhb8Q91XZ2 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb8Q91XZ2 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb8Q91XZ2 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.35□□□□□ -0.11
Pcdhb8Q91XZ2 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.35□□□□□ -0.11
Pcdhb8Q91XZ2 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.35□□□□□ -0.11
Pcdhb8Q91XZ2 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.35□□□□□ -0.11
Pcdhb8Q91XZ2 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb8Q91XZ2 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb8Q91XZ2 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Pcdhb8Q91XZ2 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb8Q91XZ2 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhb8Q91XZ2 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb8Q91XZ2 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb8Q91XZ2 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb8Q91XZ2 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb8Q91XZ2 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhb8Q91XZ2 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pcdhb8Q91XZ2 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhb8Q91XZ2 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb8Q91XZ2 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms