Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rab40cQ8VHQ4 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rab40cQ8VHQ4 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rab40cQ8VHQ4 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rab40cQ8VHQ4 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rab40cQ8VHQ4 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.03□□□□□ -0.48
Rab40cQ8VHQ4 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rab40cQ8VHQ4 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rab40cQ8VHQ4 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rab40cQ8VHQ4 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rab40cQ8VHQ4 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rab40cQ8VHQ4 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rab40cQ8VHQ4 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rab40cQ8VHQ4 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.03□□□□□ -0.48
Rab40cQ8VHQ4 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rab40cQ8VHQ4 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rab40cQ8VHQ4 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rab40cQ8VHQ4 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Rab40cQ8VHQ4 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Rab40cQ8VHQ4 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rab40cQ8VHQ4 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Rab40cQ8VHQ4 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rab40cQ8VHQ4 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rab40cQ8VHQ4 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.02□□□□□ -0.48
Rab40cQ8VHQ4 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Rab40cQ8VHQ4 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rab40cQ8VHQ4 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rab40cQ8VHQ4 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rab40cQ8VHQ4 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rab40cQ8VHQ4 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.02□□□□□ -0.49
Rab40cQ8VHQ4 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rab40cQ8VHQ4 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rab40cQ8VHQ4 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.02□□□□□ -0.49
Rab40cQ8VHQ4 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Rab40cQ8VHQ4 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rab40cQ8VHQ4 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rab40cQ8VHQ4 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rab40cQ8VHQ4 Gm4459-201ENSMUST00000118750 468 ntBASIC12.02□□□□□ -0.49
Rab40cQ8VHQ4 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.02□□□□□ -0.49
Rab40cQ8VHQ4 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Rab40cQ8VHQ4 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.02□□□□□ -0.49
Rab40cQ8VHQ4 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.02□□□□□ -0.49
Rab40cQ8VHQ4 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rab40cQ8VHQ4 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.02□□□□□ -0.49
Rab40cQ8VHQ4 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rab40cQ8VHQ4 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.02□□□□□ -0.49
Rab40cQ8VHQ4 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rab40cQ8VHQ4 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rab40cQ8VHQ4 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.02□□□□□ -0.49
Rab40cQ8VHQ4 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rab40cQ8VHQ4 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Rab40cQ8VHQ4 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.02□□□□□ -0.49
Rab40cQ8VHQ4 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rab40cQ8VHQ4 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Rab40cQ8VHQ4 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rab40cQ8VHQ4 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rab40cQ8VHQ4 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rab40cQ8VHQ4 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rab40cQ8VHQ4 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Rab40cQ8VHQ4 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rab40cQ8VHQ4 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab40cQ8VHQ4 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab40cQ8VHQ4 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rab40cQ8VHQ4 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab40cQ8VHQ4 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab40cQ8VHQ4 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Rab40cQ8VHQ4 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Rab40cQ8VHQ4 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab40cQ8VHQ4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Rab40cQ8VHQ4 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab40cQ8VHQ4 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.01□□□□□ -0.49
Rab40cQ8VHQ4 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab40cQ8VHQ4 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab40cQ8VHQ4 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.01□□□□□ -0.49
Rab40cQ8VHQ4 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.01□□□□□ -0.49
Rab40cQ8VHQ4 Gm8655-201ENSMUST00000221159 852 ntBASIC12.01□□□□□ -0.49
Rab40cQ8VHQ4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rab40cQ8VHQ4 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab40cQ8VHQ4 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.01□□□□□ -0.49
Rab40cQ8VHQ4 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rab40cQ8VHQ4 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rab40cQ8VHQ4 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab40cQ8VHQ4 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab40cQ8VHQ4 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab40cQ8VHQ4 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab40cQ8VHQ4 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab40cQ8VHQ4 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Rab40cQ8VHQ4 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.01□□□□□ -0.49
Rab40cQ8VHQ4 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rab40cQ8VHQ4 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab40cQ8VHQ4 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.01□□□□□ -0.49
Rab40cQ8VHQ4 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab40cQ8VHQ4 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rab40cQ8VHQ4 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab40cQ8VHQ4 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rab40cQ8VHQ4 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Rab40cQ8VHQ4 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Rab40cQ8VHQ4 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12□□□□□ -0.49
Rab40cQ8VHQ4 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rab40cQ8VHQ4 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 138.6 ms