Protein–RNA interactions for Protein: Q8VC66

Ssx2ip, Afadin- and alpha-actinin-binding protein, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx2ipQ8VC66 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssx2ipQ8VC66 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssx2ipQ8VC66 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssx2ipQ8VC66 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ssx2ipQ8VC66 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssx2ipQ8VC66 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssx2ipQ8VC66 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssx2ipQ8VC66 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ssx2ipQ8VC66 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssx2ipQ8VC66 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ssx2ipQ8VC66 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Ssx2ipQ8VC66 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Ssx2ipQ8VC66 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssx2ipQ8VC66 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssx2ipQ8VC66 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.11■□□□□ 0.01
Ssx2ipQ8VC66 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ssx2ipQ8VC66 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ssx2ipQ8VC66 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.11■□□□□ 0.01
Ssx2ipQ8VC66 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssx2ipQ8VC66 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssx2ipQ8VC66 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssx2ipQ8VC66 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Ssx2ipQ8VC66 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssx2ipQ8VC66 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.1■□□□□ 0.01
Ssx2ipQ8VC66 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ssx2ipQ8VC66 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssx2ipQ8VC66 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ssx2ipQ8VC66 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ssx2ipQ8VC66 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssx2ipQ8VC66 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssx2ipQ8VC66 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.1■□□□□ 0.01
Ssx2ipQ8VC66 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssx2ipQ8VC66 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ssx2ipQ8VC66 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssx2ipQ8VC66 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.1■□□□□ 0.01
Ssx2ipQ8VC66 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssx2ipQ8VC66 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.1■□□□□ 0.01
Ssx2ipQ8VC66 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.1■□□□□ 0.01
Ssx2ipQ8VC66 Gm4899-201ENSMUST00000178708 719 ntBASIC15.1■□□□□ 0.01
Ssx2ipQ8VC66 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ssx2ipQ8VC66 Gm2213-201ENSMUST00000197485 688 ntBASIC15.1■□□□□ 0.01
Ssx2ipQ8VC66 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.1■□□□□ 0.01
Ssx2ipQ8VC66 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.1■□□□□ 0.01
Ssx2ipQ8VC66 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssx2ipQ8VC66 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ssx2ipQ8VC66 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssx2ipQ8VC66 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssx2ipQ8VC66 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssx2ipQ8VC66 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssx2ipQ8VC66 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssx2ipQ8VC66 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssx2ipQ8VC66 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssx2ipQ8VC66 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssx2ipQ8VC66 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ssx2ipQ8VC66 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssx2ipQ8VC66 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssx2ipQ8VC66 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssx2ipQ8VC66 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.09■□□□□ 0.01
Ssx2ipQ8VC66 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssx2ipQ8VC66 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssx2ipQ8VC66 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.09■□□□□ 0.01
Ssx2ipQ8VC66 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ssx2ipQ8VC66 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.09■□□□□ 0.01
Ssx2ipQ8VC66 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.09■□□□□ 0.01
Ssx2ipQ8VC66 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssx2ipQ8VC66 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Ssx2ipQ8VC66 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Ssx2ipQ8VC66 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssx2ipQ8VC66 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ssx2ipQ8VC66 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.09■□□□□ 0.01
Ssx2ipQ8VC66 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.09■□□□□ 0.01
Ssx2ipQ8VC66 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssx2ipQ8VC66 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ssx2ipQ8VC66 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Ssx2ipQ8VC66 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0.01
Ssx2ipQ8VC66 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ssx2ipQ8VC66 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ssx2ipQ8VC66 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ssx2ipQ8VC66 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.08■□□□□ 0.01
Ssx2ipQ8VC66 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Ssx2ipQ8VC66 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssx2ipQ8VC66 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ssx2ipQ8VC66 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.08■□□□□ 0
Ssx2ipQ8VC66 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssx2ipQ8VC66 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ssx2ipQ8VC66 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssx2ipQ8VC66 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ssx2ipQ8VC66 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssx2ipQ8VC66 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ssx2ipQ8VC66 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssx2ipQ8VC66 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.08■□□□□ 0
Ssx2ipQ8VC66 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ssx2ipQ8VC66 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssx2ipQ8VC66 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ssx2ipQ8VC66 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ssx2ipQ8VC66 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ssx2ipQ8VC66 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssx2ipQ8VC66 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssx2ipQ8VC66 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ssx2ipQ8VC66 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms