Protein–RNA interactions for Protein: Q8K5B8

Hoxc12, Homeobox protein Hox-C12, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc12Q8K5B8 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.33□□□□□ -0.44
Hoxc12Q8K5B8 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.33□□□□□ -0.44
Hoxc12Q8K5B8 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Hoxc12Q8K5B8 Gm10576-201ENSMUST00000191927 825 ntBASIC12.33□□□□□ -0.44
Hoxc12Q8K5B8 Gm44335-201ENSMUST00000196879 141 ntBASIC12.33□□□□□ -0.44
Hoxc12Q8K5B8 Gm44297-201ENSMUST00000198304 141 ntBASIC12.33□□□□□ -0.44
Hoxc12Q8K5B8 Gm44346-201ENSMUST00000198851 141 ntBASIC12.33□□□□□ -0.44
Hoxc12Q8K5B8 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.33□□□□□ -0.44
Hoxc12Q8K5B8 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.33□□□□□ -0.44
Hoxc12Q8K5B8 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc12Q8K5B8 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc12Q8K5B8 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc12Q8K5B8 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc12Q8K5B8 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc12Q8K5B8 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Hoxc12Q8K5B8 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc12Q8K5B8 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc12Q8K5B8 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc12Q8K5B8 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc12Q8K5B8 Grk6-207ENSMUST00000225925 2769 ntBASIC12.33□□□□□ -0.44
Hoxc12Q8K5B8 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc12Q8K5B8 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc12Q8K5B8 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Gm6973-201ENSMUST00000117080 721 ntBASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Gm43125-201ENSMUST00000201724 730 ntBASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxc12Q8K5B8 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Hoxc12Q8K5B8 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc12Q8K5B8 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc12Q8K5B8 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc12Q8K5B8 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Hoxc12Q8K5B8 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.31□□□□□ -0.44
Hoxc12Q8K5B8 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.31□□□□□ -0.44
Hoxc12Q8K5B8 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.31□□□□□ -0.44
Hoxc12Q8K5B8 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc12Q8K5B8 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.31□□□□□ -0.44
Hoxc12Q8K5B8 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc12Q8K5B8 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Hoxc12Q8K5B8 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc12Q8K5B8 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc12Q8K5B8 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.31□□□□□ -0.44
Hoxc12Q8K5B8 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc12Q8K5B8 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.31□□□□□ -0.44
Hoxc12Q8K5B8 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.31□□□□□ -0.44
Hoxc12Q8K5B8 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc12Q8K5B8 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Hoxc12Q8K5B8 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc12Q8K5B8 Gm43474-201ENSMUST00000196415 774 ntBASIC12.31□□□□□ -0.44
Hoxc12Q8K5B8 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc12Q8K5B8 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.31□□□□□ -0.44
Hoxc12Q8K5B8 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.31□□□□□ -0.44
Hoxc12Q8K5B8 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.31□□□□□ -0.44
Hoxc12Q8K5B8 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.31□□□□□ -0.44
Hoxc12Q8K5B8 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc12Q8K5B8 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Hoxc12Q8K5B8 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc12Q8K5B8 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxc12Q8K5B8 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Hoxc12Q8K5B8 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.31□□□□□ -0.44
Hoxc12Q8K5B8 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms