Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Shtn1Q8K2Q9 Gm6222-201ENSMUST00000120787 396 ntBASIC17.28■□□□□ 0.36
Shtn1Q8K2Q9 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Shtn1Q8K2Q9 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Shtn1Q8K2Q9 Gm3436-201ENSMUST00000179930 840 ntBASIC17.28■□□□□ 0.36
Shtn1Q8K2Q9 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Shtn1Q8K2Q9 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Shtn1Q8K2Q9 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shtn1Q8K2Q9 Gm6007-201ENSMUST00000208170 823 ntBASIC17.28■□□□□ 0.36
Shtn1Q8K2Q9 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shtn1Q8K2Q9 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shtn1Q8K2Q9 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shtn1Q8K2Q9 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Shtn1Q8K2Q9 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shtn1Q8K2Q9 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shtn1Q8K2Q9 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shtn1Q8K2Q9 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Shtn1Q8K2Q9 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Shtn1Q8K2Q9 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.28■□□□□ 0.36
Shtn1Q8K2Q9 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shtn1Q8K2Q9 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shtn1Q8K2Q9 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shtn1Q8K2Q9 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shtn1Q8K2Q9 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shtn1Q8K2Q9 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shtn1Q8K2Q9 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shtn1Q8K2Q9 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shtn1Q8K2Q9 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shtn1Q8K2Q9 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shtn1Q8K2Q9 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shtn1Q8K2Q9 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shtn1Q8K2Q9 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC17.27■□□□□ 0.36
Shtn1Q8K2Q9 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shtn1Q8K2Q9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shtn1Q8K2Q9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Shtn1Q8K2Q9 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.27■□□□□ 0.36
Shtn1Q8K2Q9 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Shtn1Q8K2Q9 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shtn1Q8K2Q9 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shtn1Q8K2Q9 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shtn1Q8K2Q9 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shtn1Q8K2Q9 Gm15653-201ENSMUST00000119247 907 ntBASIC17.27■□□□□ 0.36
Shtn1Q8K2Q9 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC17.27■□□□□ 0.36
Shtn1Q8K2Q9 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shtn1Q8K2Q9 Gm21854-201ENSMUST00000179901 471 ntBASIC17.27■□□□□ 0.36
Shtn1Q8K2Q9 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.27■□□□□ 0.36
Shtn1Q8K2Q9 Gm43630-201ENSMUST00000201550 776 ntBASIC17.27■□□□□ 0.36
Shtn1Q8K2Q9 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC17.27■□□□□ 0.36
Shtn1Q8K2Q9 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC17.27■□□□□ 0.36
Shtn1Q8K2Q9 Gm18624-201ENSMUST00000220966 658 ntBASIC17.27■□□□□ 0.36
Shtn1Q8K2Q9 Gm9797-201ENSMUST00000052902 613 ntBASIC17.27■□□□□ 0.36
Shtn1Q8K2Q9 Gm9899-201ENSMUST00000065519 555 ntBASIC17.27■□□□□ 0.36
Shtn1Q8K2Q9 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shtn1Q8K2Q9 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Shtn1Q8K2Q9 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.27■□□□□ 0.35
Shtn1Q8K2Q9 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Shtn1Q8K2Q9 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Shtn1Q8K2Q9 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.35
Shtn1Q8K2Q9 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Shtn1Q8K2Q9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shtn1Q8K2Q9 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Shtn1Q8K2Q9 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shtn1Q8K2Q9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shtn1Q8K2Q9 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shtn1Q8K2Q9 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shtn1Q8K2Q9 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shtn1Q8K2Q9 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shtn1Q8K2Q9 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shtn1Q8K2Q9 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shtn1Q8K2Q9 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Shtn1Q8K2Q9 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shtn1Q8K2Q9 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Shtn1Q8K2Q9 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shtn1Q8K2Q9 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC17.26■□□□□ 0.35
Shtn1Q8K2Q9 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Shtn1Q8K2Q9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shtn1Q8K2Q9 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Shtn1Q8K2Q9 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Shtn1Q8K2Q9 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC17.26■□□□□ 0.35
Shtn1Q8K2Q9 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shtn1Q8K2Q9 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shtn1Q8K2Q9 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Shtn1Q8K2Q9 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Shtn1Q8K2Q9 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shtn1Q8K2Q9 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.25■□□□□ 0.35
Shtn1Q8K2Q9 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC17.25■□□□□ 0.35
Shtn1Q8K2Q9 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shtn1Q8K2Q9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Shtn1Q8K2Q9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shtn1Q8K2Q9 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shtn1Q8K2Q9 Gm11918-201ENSMUST00000121660 179 ntBASIC17.25■□□□□ 0.35
Shtn1Q8K2Q9 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.25■□□□□ 0.35
Shtn1Q8K2Q9 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Shtn1Q8K2Q9 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shtn1Q8K2Q9 Gm28760-201ENSMUST00000185995 736 ntBASIC17.25■□□□□ 0.35
Shtn1Q8K2Q9 Gm31326-201ENSMUST00000191856 1048 ntBASIC17.25■□□□□ 0.35
Shtn1Q8K2Q9 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shtn1Q8K2Q9 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shtn1Q8K2Q9 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Shtn1Q8K2Q9 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms