Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc5Q8CG46 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc5Q8CG46 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc5Q8CG46 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Smc5Q8CG46 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc5Q8CG46 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Smc5Q8CG46 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Smc5Q8CG46 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smc5Q8CG46 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Smc5Q8CG46 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc5Q8CG46 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc5Q8CG46 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc5Q8CG46 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc5Q8CG46 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc5Q8CG46 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smc5Q8CG46 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc5Q8CG46 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc5Q8CG46 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smc5Q8CG46 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc5Q8CG46 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc5Q8CG46 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc5Q8CG46 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC18.17■□□□□ 0.5
Smc5Q8CG46 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc5Q8CG46 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.17■□□□□ 0.5
Smc5Q8CG46 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Smc5Q8CG46 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.17■□□□□ 0.5
Smc5Q8CG46 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Smc5Q8CG46 Gm26513-201ENSMUST00000181802 2489 ntBASIC18.17■□□□□ 0.5
Smc5Q8CG46 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC18.17■□□□□ 0.5
Smc5Q8CG46 Gm38391-201ENSMUST00000191720 4069 ntBASIC18.17■□□□□ 0.5
Smc5Q8CG46 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Smc5Q8CG46 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smc5Q8CG46 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smc5Q8CG46 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc5Q8CG46 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc5Q8CG46 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc5Q8CG46 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc5Q8CG46 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc5Q8CG46 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smc5Q8CG46 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc5Q8CG46 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.16■□□□□ 0.5
Smc5Q8CG46 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc5Q8CG46 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc5Q8CG46 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Smc5Q8CG46 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc5Q8CG46 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC18.16■□□□□ 0.5
Smc5Q8CG46 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC18.16■□□□□ 0.5
Smc5Q8CG46 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc5Q8CG46 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC18.16■□□□□ 0.5
Smc5Q8CG46 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.16■□□□□ 0.5
Smc5Q8CG46 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.16■□□□□ 0.5
Smc5Q8CG46 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
Smc5Q8CG46 AV026068-213ENSMUST00000223675 1171 ntBASIC18.16■□□□□ 0.5
Smc5Q8CG46 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc5Q8CG46 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc5Q8CG46 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc5Q8CG46 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc5Q8CG46 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc5Q8CG46 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc5Q8CG46 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smc5Q8CG46 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smc5Q8CG46 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smc5Q8CG46 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc5Q8CG46 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smc5Q8CG46 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smc5Q8CG46 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc5Q8CG46 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc5Q8CG46 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc5Q8CG46 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc5Q8CG46 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc5Q8CG46 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC18.15■□□□□ 0.5
Smc5Q8CG46 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smc5Q8CG46 Gm37411-201ENSMUST00000194180 2282 ntBASIC18.15■□□□□ 0.5
Smc5Q8CG46 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc5Q8CG46 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc5Q8CG46 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc5Q8CG46 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Smc5Q8CG46 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Smc5Q8CG46 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.15■□□□□ 0.5
Smc5Q8CG46 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smc5Q8CG46 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.15■□□□□ 0.5
Smc5Q8CG46 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Smc5Q8CG46 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Smc5Q8CG46 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc5Q8CG46 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc5Q8CG46 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Smc5Q8CG46 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smc5Q8CG46 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc5Q8CG46 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Smc5Q8CG46 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Smc5Q8CG46 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Smc5Q8CG46 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC18.14■□□□□ 0.49
Smc5Q8CG46 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc5Q8CG46 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Smc5Q8CG46 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc5Q8CG46 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc5Q8CG46 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smc5Q8CG46 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Smc5Q8CG46 Gm24589-201ENSMUST00000116692 94 ntBASIC18.14■□□□□ 0.49
Smc5Q8CG46 Gm14042-201ENSMUST00000120139 833 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms