Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup88Q8CEC0 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup88Q8CEC0 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Nup88Q8CEC0 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup88Q8CEC0 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nup88Q8CEC0 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup88Q8CEC0 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nup88Q8CEC0 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup88Q8CEC0 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup88Q8CEC0 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup88Q8CEC0 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.35■□□□□ 0.37
Nup88Q8CEC0 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.35■□□□□ 0.37
Nup88Q8CEC0 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.35■□□□□ 0.37
Nup88Q8CEC0 Gm8318-201ENSMUST00000182954 872 ntBASIC17.35■□□□□ 0.37
Nup88Q8CEC0 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.35■□□□□ 0.37
Nup88Q8CEC0 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup88Q8CEC0 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup88Q8CEC0 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup88Q8CEC0 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nup88Q8CEC0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Nup88Q8CEC0 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup88Q8CEC0 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Nup88Q8CEC0 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup88Q8CEC0 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup88Q8CEC0 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup88Q8CEC0 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.35■□□□□ 0.37
Nup88Q8CEC0 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup88Q8CEC0 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nup88Q8CEC0 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup88Q8CEC0 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nup88Q8CEC0 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup88Q8CEC0 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup88Q8CEC0 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.35■□□□□ 0.37
Nup88Q8CEC0 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nup88Q8CEC0 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Nup88Q8CEC0 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup88Q8CEC0 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup88Q8CEC0 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nup88Q8CEC0 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Nup88Q8CEC0 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup88Q8CEC0 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Nup88Q8CEC0 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Nup88Q8CEC0 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup88Q8CEC0 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nup88Q8CEC0 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup88Q8CEC0 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nup88Q8CEC0 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nup88Q8CEC0 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Nup88Q8CEC0 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup88Q8CEC0 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.34■□□□□ 0.37
Nup88Q8CEC0 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.34■□□□□ 0.37
Nup88Q8CEC0 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup88Q8CEC0 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Nup88Q8CEC0 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup88Q8CEC0 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup88Q8CEC0 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Nup88Q8CEC0 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup88Q8CEC0 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup88Q8CEC0 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup88Q8CEC0 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.34■□□□□ 0.37
Nup88Q8CEC0 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nup88Q8CEC0 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Nup88Q8CEC0 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup88Q8CEC0 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC17.34■□□□□ 0.37
Nup88Q8CEC0 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nup88Q8CEC0 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nup88Q8CEC0 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Nup88Q8CEC0 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nup88Q8CEC0 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nup88Q8CEC0 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.33■□□□□ 0.36
Nup88Q8CEC0 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.33■□□□□ 0.36
Nup88Q8CEC0 Mir1895-201ENSMUST00000122615 79 ntBASIC17.33■□□□□ 0.36
Nup88Q8CEC0 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Nup88Q8CEC0 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nup88Q8CEC0 Gm27494-201ENSMUST00000184735 189 ntBASIC17.33■□□□□ 0.36
Nup88Q8CEC0 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.33■□□□□ 0.36
Nup88Q8CEC0 Gm45612-201ENSMUST00000211320 160 ntBASIC17.33■□□□□ 0.36
Nup88Q8CEC0 Gm45747-201ENSMUST00000212203 999 ntBASIC17.33■□□□□ 0.36
Nup88Q8CEC0 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.33■□□□□ 0.36
Nup88Q8CEC0 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nup88Q8CEC0 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nup88Q8CEC0 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nup88Q8CEC0 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nup88Q8CEC0 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nup88Q8CEC0 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nup88Q8CEC0 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nup88Q8CEC0 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nup88Q8CEC0 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Nup88Q8CEC0 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.33■□□□□ 0.36
Nup88Q8CEC0 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nup88Q8CEC0 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nup88Q8CEC0 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nup88Q8CEC0 Carlr-201ENSMUST00000181515 2574 ntBASIC17.33■□□□□ 0.36
Nup88Q8CEC0 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Nup88Q8CEC0 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup88Q8CEC0 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nup88Q8CEC0 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup88Q8CEC0 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nup88Q8CEC0 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Nup88Q8CEC0 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms