Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.81■□□□□ 0.12
Vcpip1Q8CDG3 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vcpip1Q8CDG3 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vcpip1Q8CDG3 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vcpip1Q8CDG3 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Vcpip1Q8CDG3 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Vcpip1Q8CDG3 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vcpip1Q8CDG3 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.8■□□□□ 0.12
Vcpip1Q8CDG3 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vcpip1Q8CDG3 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vcpip1Q8CDG3 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vcpip1Q8CDG3 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Vcpip1Q8CDG3 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Vcpip1Q8CDG3 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Vcpip1Q8CDG3 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vcpip1Q8CDG3 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vcpip1Q8CDG3 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.8■□□□□ 0.12
Vcpip1Q8CDG3 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vcpip1Q8CDG3 Gm18246-201ENSMUST00000221023 728 ntBASIC15.8■□□□□ 0.12
Vcpip1Q8CDG3 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vcpip1Q8CDG3 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vcpip1Q8CDG3 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vcpip1Q8CDG3 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vcpip1Q8CDG3 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Vcpip1Q8CDG3 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vcpip1Q8CDG3 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vcpip1Q8CDG3 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Vcpip1Q8CDG3 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vcpip1Q8CDG3 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vcpip1Q8CDG3 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vcpip1Q8CDG3 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vcpip1Q8CDG3 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Vcpip1Q8CDG3 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vcpip1Q8CDG3 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vcpip1Q8CDG3 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vcpip1Q8CDG3 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vcpip1Q8CDG3 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Vcpip1Q8CDG3 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vcpip1Q8CDG3 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Vcpip1Q8CDG3 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Vcpip1Q8CDG3 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vcpip1Q8CDG3 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vcpip1Q8CDG3 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vcpip1Q8CDG3 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.79■□□□□ 0.12
Vcpip1Q8CDG3 Gm15467-201ENSMUST00000120582 445 ntBASIC15.79■□□□□ 0.12
Vcpip1Q8CDG3 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vcpip1Q8CDG3 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Vcpip1Q8CDG3 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
Vcpip1Q8CDG3 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vcpip1Q8CDG3 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Vcpip1Q8CDG3 Mir5126-201ENSMUST00000175513 77 ntBASIC15.79■□□□□ 0.12
Vcpip1Q8CDG3 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vcpip1Q8CDG3 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vcpip1Q8CDG3 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vcpip1Q8CDG3 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vcpip1Q8CDG3 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vcpip1Q8CDG3 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vcpip1Q8CDG3 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vcpip1Q8CDG3 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vcpip1Q8CDG3 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vcpip1Q8CDG3 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Vcpip1Q8CDG3 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.79■□□□□ 0.12
Vcpip1Q8CDG3 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vcpip1Q8CDG3 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vcpip1Q8CDG3 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vcpip1Q8CDG3 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vcpip1Q8CDG3 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vcpip1Q8CDG3 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vcpip1Q8CDG3 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vcpip1Q8CDG3 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vcpip1Q8CDG3 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vcpip1Q8CDG3 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vcpip1Q8CDG3 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vcpip1Q8CDG3 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Vcpip1Q8CDG3 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vcpip1Q8CDG3 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.78■□□□□ 0.12
Vcpip1Q8CDG3 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vcpip1Q8CDG3 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.78■□□□□ 0.12
Vcpip1Q8CDG3 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vcpip1Q8CDG3 Gm43575-201ENSMUST00000196420 516 ntBASIC15.78■□□□□ 0.12
Vcpip1Q8CDG3 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vcpip1Q8CDG3 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.78■□□□□ 0.12
Vcpip1Q8CDG3 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vcpip1Q8CDG3 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Vcpip1Q8CDG3 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vcpip1Q8CDG3 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vcpip1Q8CDG3 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vcpip1Q8CDG3 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vcpip1Q8CDG3 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vcpip1Q8CDG3 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vcpip1Q8CDG3 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vcpip1Q8CDG3 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vcpip1Q8CDG3 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.78■□□□□ 0.12
Vcpip1Q8CDG3 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vcpip1Q8CDG3 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vcpip1Q8CDG3 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.78■□□□□ 0.12
Vcpip1Q8CDG3 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vcpip1Q8CDG3 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vcpip1Q8CDG3 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vcpip1Q8CDG3 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms