Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp44Q8C2S0 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp44Q8C2S0 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp44Q8C2S0 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.18■□□□□ 0.34
Usp44Q8C2S0 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp44Q8C2S0 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.18■□□□□ 0.34
Usp44Q8C2S0 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Usp44Q8C2S0 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.18■□□□□ 0.34
Usp44Q8C2S0 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.18■□□□□ 0.34
Usp44Q8C2S0 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.18■□□□□ 0.34
Usp44Q8C2S0 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp44Q8C2S0 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp44Q8C2S0 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Usp44Q8C2S0 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp44Q8C2S0 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp44Q8C2S0 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Usp44Q8C2S0 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.18■□□□□ 0.34
Usp44Q8C2S0 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp44Q8C2S0 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp44Q8C2S0 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp44Q8C2S0 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Usp44Q8C2S0 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Usp44Q8C2S0 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp44Q8C2S0 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp44Q8C2S0 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp44Q8C2S0 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp44Q8C2S0 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp44Q8C2S0 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp44Q8C2S0 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp44Q8C2S0 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp44Q8C2S0 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp44Q8C2S0 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp44Q8C2S0 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC17.17■□□□□ 0.34
Usp44Q8C2S0 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp44Q8C2S0 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Usp44Q8C2S0 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Usp44Q8C2S0 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp44Q8C2S0 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Usp44Q8C2S0 Gm44335-201ENSMUST00000196879 141 ntBASIC17.17■□□□□ 0.34
Usp44Q8C2S0 Gm44297-201ENSMUST00000198304 141 ntBASIC17.17■□□□□ 0.34
Usp44Q8C2S0 Gm44346-201ENSMUST00000198851 141 ntBASIC17.17■□□□□ 0.34
Usp44Q8C2S0 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.17■□□□□ 0.34
Usp44Q8C2S0 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Usp44Q8C2S0 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Usp44Q8C2S0 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp44Q8C2S0 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp44Q8C2S0 Gm44981-201ENSMUST00000205549 1943 ntBASIC17.17■□□□□ 0.34
Usp44Q8C2S0 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp44Q8C2S0 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp44Q8C2S0 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Usp44Q8C2S0 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp44Q8C2S0 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp44Q8C2S0 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp44Q8C2S0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp44Q8C2S0 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp44Q8C2S0 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp44Q8C2S0 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Usp44Q8C2S0 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp44Q8C2S0 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC17.16■□□□□ 0.34
Usp44Q8C2S0 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
Usp44Q8C2S0 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Usp44Q8C2S0 Gm14042-201ENSMUST00000120139 833 ntBASIC17.16■□□□□ 0.34
Usp44Q8C2S0 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp44Q8C2S0 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp44Q8C2S0 Gm10275-202ENSMUST00000168697 495 ntBASIC17.16■□□□□ 0.34
Usp44Q8C2S0 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.16■□□□□ 0.34
Usp44Q8C2S0 Gm27702-201ENSMUST00000184512 56 ntBASIC17.16■□□□□ 0.34
Usp44Q8C2S0 Gm2213-201ENSMUST00000197485 688 ntBASIC17.16■□□□□ 0.34
Usp44Q8C2S0 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.16■□□□□ 0.34
Usp44Q8C2S0 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.16■□□□□ 0.34
Usp44Q8C2S0 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.16■□□□□ 0.34
Usp44Q8C2S0 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp44Q8C2S0 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Usp44Q8C2S0 Gm10275-201ENSMUST00000092620 635 ntBASIC17.16■□□□□ 0.34
Usp44Q8C2S0 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp44Q8C2S0 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.16■□□□□ 0.34
Usp44Q8C2S0 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp44Q8C2S0 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Usp44Q8C2S0 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp44Q8C2S0 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp44Q8C2S0 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC17.16■□□□□ 0.34
Usp44Q8C2S0 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.16■□□□□ 0.34
Usp44Q8C2S0 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp44Q8C2S0 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp44Q8C2S0 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp44Q8C2S0 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Usp44Q8C2S0 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp44Q8C2S0 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp44Q8C2S0 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp44Q8C2S0 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp44Q8C2S0 Gm23935-201ENSMUST00000102303 57 ntBASIC17.15■□□□□ 0.34
Usp44Q8C2S0 Gm24270-201ENSMUST00000102326 57 ntBASIC17.15■□□□□ 0.34
Usp44Q8C2S0 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp44Q8C2S0 Gm24245-201ENSMUST00000157318 57 ntBASIC17.15■□□□□ 0.34
Usp44Q8C2S0 Gm38225-201ENSMUST00000194001 393 ntBASIC17.15■□□□□ 0.34
Usp44Q8C2S0 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp44Q8C2S0 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.15■□□□□ 0.34
Usp44Q8C2S0 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp44Q8C2S0 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp44Q8C2S0 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms