Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr7Q8BU04 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr7Q8BU04 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr7Q8BU04 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ubr7Q8BU04 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr7Q8BU04 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr7Q8BU04 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr7Q8BU04 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.81□□□□□ -0.04
Ubr7Q8BU04 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr7Q8BU04 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr7Q8BU04 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr7Q8BU04 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.81□□□□□ -0.04
Ubr7Q8BU04 Gm9719-201ENSMUST00000162765 543 ntBASIC14.81□□□□□ -0.04
Ubr7Q8BU04 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr7Q8BU04 Gm27306-201ENSMUST00000183970 107 ntBASIC14.81□□□□□ -0.04
Ubr7Q8BU04 Mir7023-201ENSMUST00000185093 64 ntBASIC14.81□□□□□ -0.04
Ubr7Q8BU04 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.81□□□□□ -0.04
Ubr7Q8BU04 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ubr7Q8BU04 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr7Q8BU04 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.81□□□□□ -0.04
Ubr7Q8BU04 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr7Q8BU04 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.81□□□□□ -0.04
Ubr7Q8BU04 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ubr7Q8BU04 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr7Q8BU04 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr7Q8BU04 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr7Q8BU04 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr7Q8BU04 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr7Q8BU04 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr7Q8BU04 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr7Q8BU04 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ubr7Q8BU04 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ubr7Q8BU04 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ubr7Q8BU04 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.8□□□□□ -0.04
Ubr7Q8BU04 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ubr7Q8BU04 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ubr7Q8BU04 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ubr7Q8BU04 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ubr7Q8BU04 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ubr7Q8BU04 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ubr7Q8BU04 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ubr7Q8BU04 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ubr7Q8BU04 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.8□□□□□ -0.04
Ubr7Q8BU04 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ubr7Q8BU04 Gm27533-201ENSMUST00000183800 152 ntBASIC14.8□□□□□ -0.04
Ubr7Q8BU04 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ubr7Q8BU04 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.8□□□□□ -0.04
Ubr7Q8BU04 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.8□□□□□ -0.04
Ubr7Q8BU04 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ubr7Q8BU04 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.8□□□□□ -0.04
Ubr7Q8BU04 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ubr7Q8BU04 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ubr7Q8BU04 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.8□□□□□ -0.04
Ubr7Q8BU04 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ubr7Q8BU04 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Ubr7Q8BU04 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ubr7Q8BU04 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ubr7Q8BU04 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ubr7Q8BU04 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ubr7Q8BU04 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ubr7Q8BU04 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ubr7Q8BU04 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ubr7Q8BU04 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ubr7Q8BU04 Gm8410-201ENSMUST00000117225 605 ntBASIC14.79□□□□□ -0.04
Ubr7Q8BU04 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.79□□□□□ -0.04
Ubr7Q8BU04 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.79□□□□□ -0.04
Ubr7Q8BU04 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ubr7Q8BU04 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ubr7Q8BU04 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ubr7Q8BU04 Gm20949-201ENSMUST00000206478 952 ntBASIC14.79□□□□□ -0.04
Ubr7Q8BU04 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.79□□□□□ -0.04
Ubr7Q8BU04 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.79□□□□□ -0.04
Ubr7Q8BU04 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.79□□□□□ -0.04
Ubr7Q8BU04 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ubr7Q8BU04 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ubr7Q8BU04 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ubr7Q8BU04 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ubr7Q8BU04 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ubr7Q8BU04 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ubr7Q8BU04 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ubr7Q8BU04 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ubr7Q8BU04 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ubr7Q8BU04 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.78□□□□□ -0.04
Ubr7Q8BU04 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Ubr7Q8BU04 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ubr7Q8BU04 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ubr7Q8BU04 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.78□□□□□ -0.04
Ubr7Q8BU04 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.78□□□□□ -0.04
Ubr7Q8BU04 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ubr7Q8BU04 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ubr7Q8BU04 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ubr7Q8BU04 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ubr7Q8BU04 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ubr7Q8BU04 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ubr7Q8BU04 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ubr7Q8BU04 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ubr7Q8BU04 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ubr7Q8BU04 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ubr7Q8BU04 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ubr7Q8BU04 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms