Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Suds3Q8BR65 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Suds3Q8BR65 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Suds3Q8BR65 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.02
Suds3Q8BR65 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Suds3Q8BR65 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Suds3Q8BR65 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Suds3Q8BR65 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Suds3Q8BR65 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Suds3Q8BR65 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.14■□□□□ 0.01
Suds3Q8BR65 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Suds3Q8BR65 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Suds3Q8BR65 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Suds3Q8BR65 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Suds3Q8BR65 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.14■□□□□ 0.01
Suds3Q8BR65 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.14■□□□□ 0.01
Suds3Q8BR65 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.14■□□□□ 0.01
Suds3Q8BR65 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Suds3Q8BR65 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Suds3Q8BR65 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Suds3Q8BR65 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Suds3Q8BR65 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Suds3Q8BR65 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Suds3Q8BR65 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Suds3Q8BR65 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Suds3Q8BR65 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Suds3Q8BR65 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Suds3Q8BR65 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Suds3Q8BR65 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Suds3Q8BR65 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Suds3Q8BR65 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Suds3Q8BR65 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Suds3Q8BR65 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Suds3Q8BR65 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Suds3Q8BR65 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Suds3Q8BR65 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
Suds3Q8BR65 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Suds3Q8BR65 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.13■□□□□ 0.01
Suds3Q8BR65 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Suds3Q8BR65 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Suds3Q8BR65 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.13■□□□□ 0.01
Suds3Q8BR65 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Suds3Q8BR65 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Suds3Q8BR65 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Suds3Q8BR65 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Suds3Q8BR65 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Suds3Q8BR65 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.13■□□□□ 0.01
Suds3Q8BR65 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Suds3Q8BR65 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Suds3Q8BR65 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Suds3Q8BR65 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Suds3Q8BR65 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Suds3Q8BR65 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Suds3Q8BR65 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Suds3Q8BR65 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Suds3Q8BR65 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Suds3Q8BR65 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Suds3Q8BR65 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Suds3Q8BR65 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Suds3Q8BR65 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Suds3Q8BR65 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Suds3Q8BR65 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Suds3Q8BR65 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Suds3Q8BR65 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.12■□□□□ 0.01
Suds3Q8BR65 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Suds3Q8BR65 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.12■□□□□ 0.01
Suds3Q8BR65 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Suds3Q8BR65 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Suds3Q8BR65 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Suds3Q8BR65 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Suds3Q8BR65 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.12■□□□□ 0.01
Suds3Q8BR65 Gm14494-201ENSMUST00000118786 435 ntBASIC15.12■□□□□ 0.01
Suds3Q8BR65 Gm9727-201ENSMUST00000161387 555 ntBASIC15.12■□□□□ 0.01
Suds3Q8BR65 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.12■□□□□ 0.01
Suds3Q8BR65 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Suds3Q8BR65 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Suds3Q8BR65 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Suds3Q8BR65 Efs-202ENSMUST00000227037 2540 ntBASIC15.12■□□□□ 0.01
Suds3Q8BR65 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Suds3Q8BR65 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Suds3Q8BR65 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Suds3Q8BR65 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Suds3Q8BR65 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Suds3Q8BR65 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Suds3Q8BR65 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.12■□□□□ 0.01
Suds3Q8BR65 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Suds3Q8BR65 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Suds3Q8BR65 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Suds3Q8BR65 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Suds3Q8BR65 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Suds3Q8BR65 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Suds3Q8BR65 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Suds3Q8BR65 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Suds3Q8BR65 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.11■□□□□ 0.01
Suds3Q8BR65 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Suds3Q8BR65 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Suds3Q8BR65 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Suds3Q8BR65 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Suds3Q8BR65 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Suds3Q8BR65 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms