Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ckap4Q8BMK4 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ckap4Q8BMK4 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ckap4Q8BMK4 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ckap4Q8BMK4 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.94□□□□□ -0.18
Ckap4Q8BMK4 Gm15173-201ENSMUST00000122049 433 ntBASIC13.94□□□□□ -0.18
Ckap4Q8BMK4 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Ckap4Q8BMK4 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ckap4Q8BMK4 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ckap4Q8BMK4 Gm7230-201ENSMUST00000173026 815 ntBASIC13.94□□□□□ -0.18
Ckap4Q8BMK4 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ckap4Q8BMK4 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ckap4Q8BMK4 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ckap4Q8BMK4 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ckap4Q8BMK4 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ckap4Q8BMK4 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
Ckap4Q8BMK4 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ckap4Q8BMK4 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ckap4Q8BMK4 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ckap4Q8BMK4 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ckap4Q8BMK4 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ckap4Q8BMK4 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ckap4Q8BMK4 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ckap4Q8BMK4 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ckap4Q8BMK4 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ckap4Q8BMK4 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ckap4Q8BMK4 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ckap4Q8BMK4 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ckap4Q8BMK4 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Ckap4Q8BMK4 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Ckap4Q8BMK4 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ckap4Q8BMK4 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ckap4Q8BMK4 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ckap4Q8BMK4 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ckap4Q8BMK4 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ckap4Q8BMK4 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ckap4Q8BMK4 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ckap4Q8BMK4 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ckap4Q8BMK4 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ckap4Q8BMK4 Gm7862-201ENSMUST00000121461 292 ntBASIC13.93□□□□□ -0.18
Ckap4Q8BMK4 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ckap4Q8BMK4 Gm37153-201ENSMUST00000193637 231 ntBASIC13.93□□□□□ -0.18
Ckap4Q8BMK4 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ckap4Q8BMK4 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.93□□□□□ -0.18
Ckap4Q8BMK4 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ckap4Q8BMK4 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ckap4Q8BMK4 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ckap4Q8BMK4 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ckap4Q8BMK4 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ckap4Q8BMK4 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Ckap4Q8BMK4 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.93□□□□□ -0.18
Ckap4Q8BMK4 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.93□□□□□ -0.18
Ckap4Q8BMK4 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.93□□□□□ -0.18
Ckap4Q8BMK4 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Ckap4Q8BMK4 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ckap4Q8BMK4 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ckap4Q8BMK4 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ckap4Q8BMK4 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ckap4Q8BMK4 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ckap4Q8BMK4 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ckap4Q8BMK4 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ckap4Q8BMK4 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ckap4Q8BMK4 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ckap4Q8BMK4 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ckap4Q8BMK4 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ckap4Q8BMK4 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ckap4Q8BMK4 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ckap4Q8BMK4 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ckap4Q8BMK4 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ckap4Q8BMK4 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ckap4Q8BMK4 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ckap4Q8BMK4 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ckap4Q8BMK4 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ckap4Q8BMK4 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ckap4Q8BMK4 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ckap4Q8BMK4 Gm13884-201ENSMUST00000118103 829 ntBASIC13.92□□□□□ -0.18
Ckap4Q8BMK4 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.92□□□□□ -0.18
Ckap4Q8BMK4 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ckap4Q8BMK4 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ckap4Q8BMK4 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Ckap4Q8BMK4 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.92□□□□□ -0.18
Ckap4Q8BMK4 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.92□□□□□ -0.18
Ckap4Q8BMK4 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.92□□□□□ -0.18
Ckap4Q8BMK4 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ckap4Q8BMK4 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ckap4Q8BMK4 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ckap4Q8BMK4 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ckap4Q8BMK4 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.92□□□□□ -0.18
Ckap4Q8BMK4 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ckap4Q8BMK4 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ckap4Q8BMK4 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ckap4Q8BMK4 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
Ckap4Q8BMK4 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ckap4Q8BMK4 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.92□□□□□ -0.18
Ckap4Q8BMK4 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ckap4Q8BMK4 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ckap4Q8BMK4 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ckap4Q8BMK4 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ckap4Q8BMK4 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ckap4Q8BMK4 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms