Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Gm45331-201ENSMUST00000209868 554 ntBASIC20.58■□□□□ 0.88
Usp54Q8BL06 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Usp54Q8BL06 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Usp54Q8BL06 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp54Q8BL06 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Usp54Q8BL06 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp54Q8BL06 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC20.57■□□□□ 0.88
Usp54Q8BL06 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Usp54Q8BL06 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Usp54Q8BL06 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp54Q8BL06 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp54Q8BL06 Gm14660-201ENSMUST00000119809 575 ntBASIC20.57■□□□□ 0.88
Usp54Q8BL06 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC20.57■□□□□ 0.88
Usp54Q8BL06 Mir1982-201ENSMUST00000157368 74 ntBASIC20.57■□□□□ 0.88
Usp54Q8BL06 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC20.57■□□□□ 0.88
Usp54Q8BL06 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Usp54Q8BL06 Gm44799-201ENSMUST00000207639 1202 ntBASIC20.57■□□□□ 0.88
Usp54Q8BL06 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp54Q8BL06 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC20.57■□□□□ 0.88
Usp54Q8BL06 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp54Q8BL06 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp54Q8BL06 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp54Q8BL06 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp54Q8BL06 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC20.57■□□□□ 0.88
Usp54Q8BL06 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp54Q8BL06 Gm9200-201ENSMUST00000118513 1354 ntBASIC20.57■□□□□ 0.88
Usp54Q8BL06 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Usp54Q8BL06 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Usp54Q8BL06 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp54Q8BL06 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp54Q8BL06 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Usp54Q8BL06 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC20.57■□□□□ 0.88
Usp54Q8BL06 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp54Q8BL06 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp54Q8BL06 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Usp54Q8BL06 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp54Q8BL06 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC20.56■□□□□ 0.88
Usp54Q8BL06 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp54Q8BL06 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp54Q8BL06 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp54Q8BL06 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp54Q8BL06 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp54Q8BL06 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp54Q8BL06 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp54Q8BL06 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Usp54Q8BL06 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp54Q8BL06 AL645783.1-201ENSMUST00000221416 1832 ntBASIC20.56■□□□□ 0.88
Usp54Q8BL06 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC20.56■□□□□ 0.88
Usp54Q8BL06 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp54Q8BL06 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp54Q8BL06 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC20.55■□□□□ 0.88
Usp54Q8BL06 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp54Q8BL06 Gm15429-201ENSMUST00000151268 798 ntBASIC20.55■□□□□ 0.88
Usp54Q8BL06 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Usp54Q8BL06 Gm24196-201ENSMUST00000179161 110 ntBASIC20.55■□□□□ 0.88
Usp54Q8BL06 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp54Q8BL06 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp54Q8BL06 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp54Q8BL06 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp54Q8BL06 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Usp54Q8BL06 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp54Q8BL06 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp54Q8BL06 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp54Q8BL06 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp54Q8BL06 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp54Q8BL06 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
Usp54Q8BL06 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC20.55■□□□□ 0.88
Usp54Q8BL06 Gm13689-201ENSMUST00000119360 685 ntBASIC20.55■□□□□ 0.88
Usp54Q8BL06 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp54Q8BL06 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Usp54Q8BL06 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC20.54■□□□□ 0.88
Usp54Q8BL06 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Usp54Q8BL06 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp54Q8BL06 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp54Q8BL06 AC139350.3-201ENSMUST00000226151 420 ntBASIC20.54■□□□□ 0.88
Usp54Q8BL06 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp54Q8BL06 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Usp54Q8BL06 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Usp54Q8BL06 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp54Q8BL06 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp54Q8BL06 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp54Q8BL06 Gm9816-201ENSMUST00000122292 1414 ntBASIC20.53■□□□□ 0.88
Usp54Q8BL06 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Usp54Q8BL06 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Usp54Q8BL06 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp54Q8BL06 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp54Q8BL06 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp54Q8BL06 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Usp54Q8BL06 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Usp54Q8BL06 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp54Q8BL06 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp54Q8BL06 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp54Q8BL06 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC20.53■□□□□ 0.88
Usp54Q8BL06 Mup-ps23-201ENSMUST00000118063 630 ntBASIC20.53■□□□□ 0.88
Usp54Q8BL06 Gm13385-201ENSMUST00000121089 220 ntBASIC20.53■□□□□ 0.88
Usp54Q8BL06 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
Usp54Q8BL06 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp54Q8BL06 AC122459.1-201ENSMUST00000228373 885 ntBASIC20.53■□□□□ 0.88
Usp54Q8BL06 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp54Q8BL06 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms