Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf38Q8BI21 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf38Q8BI21 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf38Q8BI21 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf38Q8BI21 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf38Q8BI21 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Rnf38Q8BI21 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.2□□□□□ -0.14
Rnf38Q8BI21 Gm13884-201ENSMUST00000118103 829 ntBASIC14.2□□□□□ -0.14
Rnf38Q8BI21 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rnf38Q8BI21 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.2□□□□□ -0.14
Rnf38Q8BI21 Gm45167-201ENSMUST00000208007 322 ntBASIC14.2□□□□□ -0.14
Rnf38Q8BI21 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Rnf38Q8BI21 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf38Q8BI21 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf38Q8BI21 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf38Q8BI21 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf38Q8BI21 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rnf38Q8BI21 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf38Q8BI21 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Rnf38Q8BI21 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf38Q8BI21 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf38Q8BI21 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf38Q8BI21 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf38Q8BI21 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf38Q8BI21 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf38Q8BI21 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf38Q8BI21 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Rnf38Q8BI21 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf38Q8BI21 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf38Q8BI21 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf38Q8BI21 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf38Q8BI21 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Rnf38Q8BI21 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rnf38Q8BI21 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf38Q8BI21 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
Rnf38Q8BI21 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf38Q8BI21 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.19□□□□□ -0.14
Rnf38Q8BI21 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf38Q8BI21 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf38Q8BI21 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf38Q8BI21 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rnf38Q8BI21 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Rnf38Q8BI21 Gm7862-201ENSMUST00000121461 292 ntBASIC14.19□□□□□ -0.14
Rnf38Q8BI21 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.19□□□□□ -0.14
Rnf38Q8BI21 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf38Q8BI21 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.19□□□□□ -0.14
Rnf38Q8BI21 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.19□□□□□ -0.14
Rnf38Q8BI21 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf38Q8BI21 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rnf38Q8BI21 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.19□□□□□ -0.14
Rnf38Q8BI21 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf38Q8BI21 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf38Q8BI21 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf38Q8BI21 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf38Q8BI21 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf38Q8BI21 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf38Q8BI21 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.19□□□□□ -0.14
Rnf38Q8BI21 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf38Q8BI21 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf38Q8BI21 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf38Q8BI21 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf38Q8BI21 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf38Q8BI21 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf38Q8BI21 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf38Q8BI21 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf38Q8BI21 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rnf38Q8BI21 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf38Q8BI21 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Gm4899-201ENSMUST00000178708 719 ntBASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.18□□□□□ -0.14
Rnf38Q8BI21 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms