Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Clrn3Q8BHH8 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.83□□□□□ -0.19
Clrn3Q8BHH8 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.83□□□□□ -0.19
Clrn3Q8BHH8 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Clrn3Q8BHH8 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn3Q8BHH8 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.83□□□□□ -0.2
Clrn3Q8BHH8 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Clrn3Q8BHH8 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn3Q8BHH8 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Clrn3Q8BHH8 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn3Q8BHH8 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn3Q8BHH8 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn3Q8BHH8 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn3Q8BHH8 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.83□□□□□ -0.2
Clrn3Q8BHH8 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.83□□□□□ -0.2
Clrn3Q8BHH8 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Clrn3Q8BHH8 Gm2272-201ENSMUST00000194903 582 ntBASIC13.83□□□□□ -0.2
Clrn3Q8BHH8 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn3Q8BHH8 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.83□□□□□ -0.2
Clrn3Q8BHH8 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.83□□□□□ -0.2
Clrn3Q8BHH8 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Clrn3Q8BHH8 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn3Q8BHH8 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn3Q8BHH8 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn3Q8BHH8 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn3Q8BHH8 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn3Q8BHH8 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn3Q8BHH8 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn3Q8BHH8 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn3Q8BHH8 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.83□□□□□ -0.2
Clrn3Q8BHH8 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn3Q8BHH8 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn3Q8BHH8 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Clrn3Q8BHH8 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn3Q8BHH8 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Clrn3Q8BHH8 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn3Q8BHH8 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn3Q8BHH8 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn3Q8BHH8 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn3Q8BHH8 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Clrn3Q8BHH8 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn3Q8BHH8 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn3Q8BHH8 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn3Q8BHH8 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.82□□□□□ -0.2
Clrn3Q8BHH8 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.82□□□□□ -0.2
Clrn3Q8BHH8 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Clrn3Q8BHH8 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Clrn3Q8BHH8 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn3Q8BHH8 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.82□□□□□ -0.2
Clrn3Q8BHH8 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn3Q8BHH8 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn3Q8BHH8 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Clrn3Q8BHH8 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Clrn3Q8BHH8 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn3Q8BHH8 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Clrn3Q8BHH8 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn3Q8BHH8 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn3Q8BHH8 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn3Q8BHH8 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn3Q8BHH8 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn3Q8BHH8 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Clrn3Q8BHH8 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn3Q8BHH8 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Clrn3Q8BHH8 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn3Q8BHH8 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn3Q8BHH8 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn3Q8BHH8 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.82□□□□□ -0.2
Clrn3Q8BHH8 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn3Q8BHH8 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Clrn3Q8BHH8 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn3Q8BHH8 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn3Q8BHH8 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn3Q8BHH8 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn3Q8BHH8 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn3Q8BHH8 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn3Q8BHH8 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn3Q8BHH8 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.81□□□□□ -0.2
Clrn3Q8BHH8 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.81□□□□□ -0.2
Clrn3Q8BHH8 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Clrn3Q8BHH8 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn3Q8BHH8 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.81□□□□□ -0.2
Clrn3Q8BHH8 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.81□□□□□ -0.2
Clrn3Q8BHH8 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.81□□□□□ -0.2
Clrn3Q8BHH8 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn3Q8BHH8 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn3Q8BHH8 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn3Q8BHH8 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Clrn3Q8BHH8 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn3Q8BHH8 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.81□□□□□ -0.2
Clrn3Q8BHH8 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.81□□□□□ -0.2
Clrn3Q8BHH8 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Clrn3Q8BHH8 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Clrn3Q8BHH8 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn3Q8BHH8 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn3Q8BHH8 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Clrn3Q8BHH8 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn3Q8BHH8 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn3Q8BHH8 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn3Q8BHH8 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn3Q8BHH8 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms