Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Depdc1bQ8BH88 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Depdc1bQ8BH88 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.98■□□□□ 0.15
Depdc1bQ8BH88 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Depdc1bQ8BH88 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Depdc1bQ8BH88 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.98■□□□□ 0.15
Depdc1bQ8BH88 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Depdc1bQ8BH88 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Depdc1bQ8BH88 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.98■□□□□ 0.15
Depdc1bQ8BH88 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Depdc1bQ8BH88 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Depdc1bQ8BH88 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.98■□□□□ 0.15
Depdc1bQ8BH88 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.98■□□□□ 0.15
Depdc1bQ8BH88 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Depdc1bQ8BH88 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Depdc1bQ8BH88 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Depdc1bQ8BH88 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Depdc1bQ8BH88 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Depdc1bQ8BH88 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.98■□□□□ 0.15
Depdc1bQ8BH88 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Depdc1bQ8BH88 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Depdc1bQ8BH88 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Depdc1bQ8BH88 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.98■□□□□ 0.15
Depdc1bQ8BH88 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Depdc1bQ8BH88 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
Depdc1bQ8BH88 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Depdc1bQ8BH88 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Depdc1bQ8BH88 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.97■□□□□ 0.15
Depdc1bQ8BH88 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Depdc1bQ8BH88 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Depdc1bQ8BH88 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Depdc1bQ8BH88 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Depdc1bQ8BH88 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Depdc1bQ8BH88 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Depdc1bQ8BH88 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Depdc1bQ8BH88 Chchd1-203ENSMUST00000224633 557 ntBASIC15.97■□□□□ 0.15
Depdc1bQ8BH88 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Depdc1bQ8BH88 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Depdc1bQ8BH88 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Depdc1bQ8BH88 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Depdc1bQ8BH88 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Depdc1bQ8BH88 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Depdc1bQ8BH88 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Depdc1bQ8BH88 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Depdc1bQ8BH88 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Depdc1bQ8BH88 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Depdc1bQ8BH88 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Depdc1bQ8BH88 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Depdc1bQ8BH88 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Depdc1bQ8BH88 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Depdc1bQ8BH88 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Depdc1bQ8BH88 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Depdc1bQ8BH88 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Depdc1bQ8BH88 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Depdc1bQ8BH88 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Depdc1bQ8BH88 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Depdc1bQ8BH88 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Depdc1bQ8BH88 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Depdc1bQ8BH88 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Depdc1bQ8BH88 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Depdc1bQ8BH88 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Depdc1bQ8BH88 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Depdc1bQ8BH88 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Depdc1bQ8BH88 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Depdc1bQ8BH88 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Depdc1bQ8BH88 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.96■□□□□ 0.15
Depdc1bQ8BH88 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Depdc1bQ8BH88 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.96■□□□□ 0.15
Depdc1bQ8BH88 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Depdc1bQ8BH88 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Depdc1bQ8BH88 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Depdc1bQ8BH88 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Depdc1bQ8BH88 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Depdc1bQ8BH88 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Depdc1bQ8BH88 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Depdc1bQ8BH88 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.96■□□□□ 0.15
Depdc1bQ8BH88 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Depdc1bQ8BH88 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Depdc1bQ8BH88 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Depdc1bQ8BH88 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Depdc1bQ8BH88 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Depdc1bQ8BH88 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.95■□□□□ 0.14
Depdc1bQ8BH88 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Depdc1bQ8BH88 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Depdc1bQ8BH88 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Depdc1bQ8BH88 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Depdc1bQ8BH88 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
Depdc1bQ8BH88 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.95■□□□□ 0.14
Depdc1bQ8BH88 Gm13597-201ENSMUST00000121239 375 ntBASIC15.95■□□□□ 0.14
Depdc1bQ8BH88 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.95■□□□□ 0.14
Depdc1bQ8BH88 Gm11025-201ENSMUST00000140773 466 ntBASIC15.95■□□□□ 0.14
Depdc1bQ8BH88 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.95■□□□□ 0.14
Depdc1bQ8BH88 Gm44492-201ENSMUST00000197012 141 ntBASIC15.95■□□□□ 0.14
Depdc1bQ8BH88 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Depdc1bQ8BH88 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Depdc1bQ8BH88 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Depdc1bQ8BH88 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Depdc1bQ8BH88 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Depdc1bQ8BH88 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Depdc1bQ8BH88 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms