Protein–RNA interactions for Protein: Q80Z38

Shank2, SH3 and multiple ankyrin repeat domains protein 2, mousemouse

Predictions only

Length 1,476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank2Q80Z38 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shank2Q80Z38 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shank2Q80Z38 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shank2Q80Z38 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Shank2Q80Z38 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Shank2Q80Z38 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shank2Q80Z38 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shank2Q80Z38 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC18.65■□□□□ 0.58
Shank2Q80Z38 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Shank2Q80Z38 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shank2Q80Z38 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC18.65■□□□□ 0.58
Shank2Q80Z38 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Shank2Q80Z38 Gm26464-201ENSMUST00000157094 305 ntBASIC18.65■□□□□ 0.58
Shank2Q80Z38 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Shank2Q80Z38 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC18.65■□□□□ 0.58
Shank2Q80Z38 Gm18056-201ENSMUST00000207670 568 ntBASIC18.65■□□□□ 0.58
Shank2Q80Z38 Gm18061-201ENSMUST00000208350 562 ntBASIC18.65■□□□□ 0.58
Shank2Q80Z38 Gm18063-201ENSMUST00000208529 568 ntBASIC18.65■□□□□ 0.58
Shank2Q80Z38 Gm18052-201ENSMUST00000208750 559 ntBASIC18.65■□□□□ 0.58
Shank2Q80Z38 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Shank2Q80Z38 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC18.65■□□□□ 0.58
Shank2Q80Z38 AC192088.1-201ENSMUST00000227561 301 ntBASIC18.65■□□□□ 0.58
Shank2Q80Z38 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC18.65■□□□□ 0.58
Shank2Q80Z38 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Shank2Q80Z38 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shank2Q80Z38 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shank2Q80Z38 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shank2Q80Z38 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Shank2Q80Z38 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Shank2Q80Z38 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Shank2Q80Z38 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.65■□□□□ 0.58
Shank2Q80Z38 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shank2Q80Z38 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shank2Q80Z38 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shank2Q80Z38 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shank2Q80Z38 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Shank2Q80Z38 Gm12416-201ENSMUST00000120911 1008 ntBASIC18.65■□□□□ 0.58
Shank2Q80Z38 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC18.65■□□□□ 0.58
Shank2Q80Z38 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Shank2Q80Z38 Gm8565-201ENSMUST00000183259 1014 ntBASIC18.65■□□□□ 0.58
Shank2Q80Z38 Gm29649-201ENSMUST00000185649 419 ntBASIC18.65■□□□□ 0.58
Shank2Q80Z38 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC18.65■□□□□ 0.58
Shank2Q80Z38 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC18.65■□□□□ 0.58
Shank2Q80Z38 Gm43118-201ENSMUST00000199149 775 ntBASIC18.65■□□□□ 0.58
Shank2Q80Z38 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Shank2Q80Z38 Gm9823-201ENSMUST00000051212 327 ntBASIC18.65■□□□□ 0.58
Shank2Q80Z38 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shank2Q80Z38 Gm17383-201ENSMUST00000078739 1041 ntBASIC18.65■□□□□ 0.58
Shank2Q80Z38 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC18.64■□□□□ 0.58
Shank2Q80Z38 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Shank2Q80Z38 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Shank2Q80Z38 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Shank2Q80Z38 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Shank2Q80Z38 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shank2Q80Z38 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shank2Q80Z38 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shank2Q80Z38 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Shank2Q80Z38 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shank2Q80Z38 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shank2Q80Z38 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shank2Q80Z38 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shank2Q80Z38 Gm7584-201ENSMUST00000175829 940 ntBASIC18.64■□□□□ 0.57
Shank2Q80Z38 Gm5276-201ENSMUST00000196683 1047 ntBASIC18.64■□□□□ 0.57
Shank2Q80Z38 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC18.64■□□□□ 0.57
Shank2Q80Z38 Gm18934-201ENSMUST00000216671 1044 ntBASIC18.64■□□□□ 0.57
Shank2Q80Z38 Gm8598-201ENSMUST00000221184 836 ntBASIC18.64■□□□□ 0.57
Shank2Q80Z38 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shank2Q80Z38 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shank2Q80Z38 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shank2Q80Z38 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Shank2Q80Z38 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Shank2Q80Z38 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.63■□□□□ 0.57
Shank2Q80Z38 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Shank2Q80Z38 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shank2Q80Z38 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shank2Q80Z38 Gm13350-201ENSMUST00000120519 479 ntBASIC18.63■□□□□ 0.57
Shank2Q80Z38 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC18.63■□□□□ 0.57
Shank2Q80Z38 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC18.63■□□□□ 0.57
Shank2Q80Z38 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC18.63■□□□□ 0.57
Shank2Q80Z38 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC18.63■□□□□ 0.57
Shank2Q80Z38 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC18.63■□□□□ 0.57
Shank2Q80Z38 Gm4857-201ENSMUST00000192718 785 ntBASIC18.63■□□□□ 0.57
Shank2Q80Z38 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shank2Q80Z38 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shank2Q80Z38 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Shank2Q80Z38 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shank2Q80Z38 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shank2Q80Z38 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Shank2Q80Z38 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shank2Q80Z38 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shank2Q80Z38 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.63■□□□□ 0.57
Shank2Q80Z38 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Shank2Q80Z38 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Shank2Q80Z38 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shank2Q80Z38 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shank2Q80Z38 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.62■□□□□ 0.57
Shank2Q80Z38 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shank2Q80Z38 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Shank2Q80Z38 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shank2Q80Z38 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms