Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp6nlQ80XC3 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp6nlQ80XC3 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Usp6nlQ80XC3 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Usp6nlQ80XC3 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Usp6nlQ80XC3 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.19■□□□□ 0.18
Usp6nlQ80XC3 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Usp6nlQ80XC3 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp6nlQ80XC3 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp6nlQ80XC3 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC16.19■□□□□ 0.18
Usp6nlQ80XC3 Gm42612-201ENSMUST00000197986 623 ntBASIC16.19■□□□□ 0.18
Usp6nlQ80XC3 Gm43170-201ENSMUST00000199827 612 ntBASIC16.19■□□□□ 0.18
Usp6nlQ80XC3 AC130829.1-201ENSMUST00000221548 494 ntBASIC16.19■□□□□ 0.18
Usp6nlQ80XC3 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp6nlQ80XC3 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp6nlQ80XC3 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Usp6nlQ80XC3 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp6nlQ80XC3 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp6nlQ80XC3 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp6nlQ80XC3 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp6nlQ80XC3 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp6nlQ80XC3 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Usp6nlQ80XC3 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Usp6nlQ80XC3 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp6nlQ80XC3 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp6nlQ80XC3 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp6nlQ80XC3 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp6nlQ80XC3 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.18■□□□□ 0.18
Usp6nlQ80XC3 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Usp6nlQ80XC3 Gm14127-201ENSMUST00000117906 678 ntBASIC16.18■□□□□ 0.18
Usp6nlQ80XC3 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp6nlQ80XC3 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp6nlQ80XC3 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC16.18■□□□□ 0.18
Usp6nlQ80XC3 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC16.18■□□□□ 0.18
Usp6nlQ80XC3 AC132467.2-202ENSMUST00000227726 559 ntBASIC16.18■□□□□ 0.18
Usp6nlQ80XC3 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp6nlQ80XC3 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp6nlQ80XC3 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp6nlQ80XC3 Gm6180-201ENSMUST00000065243 498 ntBASIC16.18■□□□□ 0.18
Usp6nlQ80XC3 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp6nlQ80XC3 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp6nlQ80XC3 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Usp6nlQ80XC3 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp6nlQ80XC3 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp6nlQ80XC3 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp6nlQ80XC3 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp6nlQ80XC3 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Usp6nlQ80XC3 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp6nlQ80XC3 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp6nlQ80XC3 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp6nlQ80XC3 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp6nlQ80XC3 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Usp6nlQ80XC3 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp6nlQ80XC3 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp6nlQ80XC3 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp6nlQ80XC3 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Usp6nlQ80XC3 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Usp6nlQ80XC3 Gm6912-201ENSMUST00000117218 544 ntBASIC16.17■□□□□ 0.18
Usp6nlQ80XC3 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC16.17■□□□□ 0.18
Usp6nlQ80XC3 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Usp6nlQ80XC3 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Usp6nlQ80XC3 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.17■□□□□ 0.18
Usp6nlQ80XC3 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.17■□□□□ 0.18
Usp6nlQ80XC3 Gm37230-201ENSMUST00000194491 818 ntBASIC16.17■□□□□ 0.18
Usp6nlQ80XC3 Olfr286-202ENSMUST00000205305 969 ntBASIC16.17■□□□□ 0.18
Usp6nlQ80XC3 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.17■□□□□ 0.18
Usp6nlQ80XC3 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp6nlQ80XC3 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp6nlQ80XC3 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Usp6nlQ80XC3 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp6nlQ80XC3 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp6nlQ80XC3 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp6nlQ80XC3 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp6nlQ80XC3 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Usp6nlQ80XC3 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.16■□□□□ 0.18
Usp6nlQ80XC3 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Usp6nlQ80XC3 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Usp6nlQ80XC3 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.16■□□□□ 0.18
Usp6nlQ80XC3 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Usp6nlQ80XC3 Gm9522-201ENSMUST00000182394 926 ntBASIC16.16■□□□□ 0.18
Usp6nlQ80XC3 Gm6745-201ENSMUST00000199216 526 ntBASIC16.16■□□□□ 0.18
Usp6nlQ80XC3 Gm9229-201ENSMUST00000222777 126 ntBASIC16.16■□□□□ 0.18
Usp6nlQ80XC3 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp6nlQ80XC3 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp6nlQ80XC3 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Usp6nlQ80XC3 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp6nlQ80XC3 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp6nlQ80XC3 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.16■□□□□ 0.18
Usp6nlQ80XC3 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp6nlQ80XC3 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp6nlQ80XC3 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp6nlQ80XC3 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp6nlQ80XC3 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.16■□□□□ 0.18
Usp6nlQ80XC3 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp6nlQ80XC3 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.16■□□□□ 0.18
Usp6nlQ80XC3 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp6nlQ80XC3 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp6nlQ80XC3 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Usp6nlQ80XC3 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp6nlQ80XC3 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms