Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.05■□□□□ 0.16
Ctdp1Q7TSG2 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ctdp1Q7TSG2 Gm6296-201ENSMUST00000222599 943 ntBASIC16.05■□□□□ 0.16
Ctdp1Q7TSG2 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ctdp1Q7TSG2 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ctdp1Q7TSG2 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ctdp1Q7TSG2 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ctdp1Q7TSG2 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ctdp1Q7TSG2 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Ctdp1Q7TSG2 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ctdp1Q7TSG2 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ctdp1Q7TSG2 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ctdp1Q7TSG2 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.05■□□□□ 0.16
Ctdp1Q7TSG2 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 Gm4535-201ENSMUST00000182274 558 ntBASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 Gm44357-201ENSMUST00000195897 142 ntBASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 Gm19658-201ENSMUST00000196231 138 ntBASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 Gm44367-201ENSMUST00000196836 138 ntBASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 Gm44350-201ENSMUST00000197197 138 ntBASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 Gm44390-201ENSMUST00000197533 144 ntBASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 Gm44313-201ENSMUST00000198018 138 ntBASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 Gm44486-201ENSMUST00000198508 138 ntBASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 Gm44314-201ENSMUST00000199263 138 ntBASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 Gm44394-201ENSMUST00000199558 138 ntBASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 Gm44484-201ENSMUST00000199873 138 ntBASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 Gm44466-201ENSMUST00000200264 138 ntBASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 Gm44359-201ENSMUST00000200671 138 ntBASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 Gm10355-201ENSMUST00000097146 517 ntBASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ctdp1Q7TSG2 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ctdp1Q7TSG2 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.03■□□□□ 0.16
Ctdp1Q7TSG2 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ctdp1Q7TSG2 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ctdp1Q7TSG2 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ctdp1Q7TSG2 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ctdp1Q7TSG2 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ctdp1Q7TSG2 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ctdp1Q7TSG2 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ctdp1Q7TSG2 Gm7862-201ENSMUST00000121461 292 ntBASIC16.03■□□□□ 0.16
Ctdp1Q7TSG2 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.03■□□□□ 0.16
Ctdp1Q7TSG2 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ctdp1Q7TSG2 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Ctdp1Q7TSG2 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ctdp1Q7TSG2 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Ctdp1Q7TSG2 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ctdp1Q7TSG2 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ctdp1Q7TSG2 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ctdp1Q7TSG2 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ctdp1Q7TSG2 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.02■□□□□ 0.16
Ctdp1Q7TSG2 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ctdp1Q7TSG2 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ctdp1Q7TSG2 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ctdp1Q7TSG2 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Ctdp1Q7TSG2 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ctdp1Q7TSG2 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ctdp1Q7TSG2 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Ctdp1Q7TSG2 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ctdp1Q7TSG2 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.02■□□□□ 0.16
Ctdp1Q7TSG2 Gm15358-201ENSMUST00000119249 520 ntBASIC16.02■□□□□ 0.16
Ctdp1Q7TSG2 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ctdp1Q7TSG2 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ctdp1Q7TSG2 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Ctdp1Q7TSG2 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ctdp1Q7TSG2 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.02■□□□□ 0.16
Ctdp1Q7TSG2 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Ctdp1Q7TSG2 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.02■□□□□ 0.15
Ctdp1Q7TSG2 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ctdp1Q7TSG2 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ctdp1Q7TSG2 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.02■□□□□ 0.15
Ctdp1Q7TSG2 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.02■□□□□ 0.15
Ctdp1Q7TSG2 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ctdp1Q7TSG2 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Ctdp1Q7TSG2 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ctdp1Q7TSG2 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ctdp1Q7TSG2 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ctdp1Q7TSG2 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms